RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 SMARCAL1Q9NZC9 954 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 TBC1D7Q9P0N9 293 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 ARMCX3Q9UH62 379 aaPredicted RBP3.73□□□□□ -1.81
VPS8-223ENST00000485024 B3GALT5Q9Y2C3 310 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 KNSTRNQ9Y448 316 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 PTGDR2Q9Y5Y4 395 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 ARHGAP5Q13017 1502 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 ZFHX4Q86UP3 3567 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 NRXN1Q9ULB1 1477 aa3.73□□□□□ -1.81
VPS8-223ENST00000485024 PLXNC1O60486 1568 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 CHD2O14647 1828 aaKnown RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 SETXQ7Z333 2677 aaKnown RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 ZNF318Q5VUA4 2279 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 A0A1W2PPQ1 181 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 OR2M5A3KFT3 312 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 LRRD1A4D1F6 860 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ENO4A6NNW6 628 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SMTNL1A8MU46 457 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 INAFM1C9JVW0 142 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 TRIM77I1YAP6 450 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SLC33A1O00400 549 aaPredicted RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 DNM1LO00429 736 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 PLK4O00444 970 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SLC30A4O14863 429 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ZNF263O14978 683 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 XRCC3O43542 346 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SOCS5O75159 536 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 BMP10O95393 424 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ZFYP08048 801 aaPredicted RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 STMN1P16949 149 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ADRA2CP18825 462 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 POLR2CP19387 275 aaPredicted RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 SLC6A6P31641 620 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 HNF4AP41235 474 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 TMPOP42166 694 aaKnown RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 TAF6P49848 677 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ALDH3A2P51648 485 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 CD81P60033 236 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 STX1BP61266 288 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 EEF1A2Q05639 463 aaKnown RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 ANKRD20A4Q4UJ75 823 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ANKRD20A8PQ5CZ79 823 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 XKR9Q5GH70 373 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 GLRA4Q5JXX5 417 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ANKRD20A2Q5SQ80 823 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ANKRD20A1Q5TYW2 823 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ANKRD20A3Q5VUR7 823 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 MFSD12Q6NUT3 480 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 KLC3Q6P597 504 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 PIWIL3Q7Z3Z3 882 aaKnown RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 FJX1Q86VR8 437 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SPC24Q8NBT2 197 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 OR2AK2Q8NG84 335 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 CCDC107Q8WV48 283 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 NUDCD2Q8WVJ2 157 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SMPDL3BQ92485 455 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 CORO2AQ92828 525 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 DNASE1L2Q92874 299 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 CCDC47Q96A33 483 aaKnown RBP3.72□□□□□ -1.81
VPS8-223ENST00000485024 CDCA5Q96FF9 252 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 GUCD1Q96NT3 240 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 FEVQ99581 238 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 BTBD10Q9BSF8 475 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 FAM129AQ9BZQ8 928 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 DBNDD1Q9H9R9 158 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 FKRPQ9H9S5 495 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 TRPV4Q9HBA0 871 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 DNAJB9Q9UBS3 223 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 POLLQ9UGP5 575 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 SIX4Q9UIU6 781 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 ITGA11Q9UKX5 1188 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 MYO6Q9UM54 1294 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 PADI2Q9Y2J8 665 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 PLEKHG1Q9ULL1 1385 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 COL24A1Q17RW2 1714 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 PLEKHH2Q8IVE3 1493 aa3.72□□□□□ -1.81
VPS8-223ENST00000485024 GPR179Q6PRD1 2367 aa3.71□□□□□ -1.81
VPS8-223ENST00000485024 KIF27Q86VH2 1401 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 THSD7BQ9C0I4 1608 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 A0A1B0GVT2 93 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 A0A1W2PP11 408 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 OR5K3A6NET4 321 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 HEPACAM2A8MVW5 462 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 PRR32B1ATL7 298 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 PTGESO14684 152 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 CLIC2O15247 247 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 FMO6PO60774 539 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 DDNO94850 711 aaPredicted RBP3.71□□□□□ -1.82
VPS8-223ENST00000485024 C9P02748 559 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 SUPT20HL2P0C7V6 817 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 PLA2G4BP0C869 781 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 HLA-DPA1P20036 260 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 S1PR1P21453 382 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 ACAT1P24752 427 aaKnown RBP3.71□□□□□ -1.82
VPS8-223ENST00000485024 ATP6V1E1P36543 226 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 HSD17B3P37058 310 aa3.71□□□□□ -1.82
VPS8-223ENST00000485024 RFX5P48382 616 aaPredicted RBP3.71□□□□□ -1.82
VPS8-223ENST00000485024 SNU13P55769 128 aaKnown RBP3.71□□□□□ -1.82
VPS8-223ENST00000485024 SEC61A1P61619 476 aaKnown RBP3.71□□□□□ -1.82
VPS8-223ENST00000485024 ABATP80404 500 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms