RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 GCKP35557 465 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 TNFRSF4P43489 277 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 MRPS22P82650 360 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 CHIT1Q13231 466 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 C6orf10Q5SRN2 563 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 NUDT18Q6ZVK8 323 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRMT11Q7Z4G4 463 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 THOC6Q86W42 341 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 KIAA2013Q8IYS2 634 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR2L2Q8NH16 312 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZNF480Q8WV37 535 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRRC58Q96CX6 371 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 LINC00615Q96LM1 132 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 CMTM6Q9NX76 183 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 FBXL12Q9NXK8 326 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 NDE1Q9NXR1 346 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 SH2B3Q9UQQ2 575 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 DLGAP4Q9Y2H0 992 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRRC42Q9Y546 428 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 SHISA7A6NL88 538 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 LATO43561 262 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 SEC22BO75396 215 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 CATP04040 527 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 TACR1P25103 407 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ACADLP28330 430 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 HALP42357 657 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 GNPDA1P46926 289 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 AP2B1P63010 937 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 PLIN5Q00G26 463 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 TAGLNQ01995 201 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRIM25Q14258 630 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 COL19A1Q14993 1142 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 LRRC36Q1X8D7 754 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 GGTA1PQ4G0N0 100 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 RABL3Q5HYI8 236 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 TJAP1Q5JTD0 557 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC2A7Q6PXP3 512 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ADAMTSL4Q6UY14 1074 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 HACD2Q6Y1H2 254 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZFAND4Q86XD8 727 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 KRTCAP2Q8N6L1 136 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 PCYOX1LQ8NBM8 494 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 PHC3Q8NDX5 983 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR56A3Q8NH54 315 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 CLHC1Q8NHS4 586 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 DNAJB14Q8TBM8 379 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 SELENOMQ8WWX9 145 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ROPN1LQ96C74 230 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 APIPQ96GX9 242 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 CCDC138Q96M89 665 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 UHRF1Q96T88 793 aaPredicted RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 GABRG3Q99928 467 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZDHHC5Q9C0B5 715 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 PFDN4Q9NQP4 134 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 IRAK4Q9NWZ3 460 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 ZIM2Q9NZV7 527 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 LIMD1Q9UGP4 676 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 RAPGEFL1Q9UHV5 662 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 GPR34Q9UPC5 381 aa8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 CFAP20Q9Y6A4 193 aaKnown RBP8.58□□□□□ -1.04
CDC42SE1-204ENST00000483763 MGAT4DA6NG13 374 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 CCDC154A6NI56 674 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 BBIP1A8MTZ0 92 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TRIM38O00635 465 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 LIN7AO14910 233 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 MBTPS2O43462 519 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 RGS14O43566 566 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 AP1G1O43747 822 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 RNASEH1O60930 286 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 FKBP6O75344 327 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 EEDO75530 441 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 ADH1BP00325 375 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 NAT1P18440 290 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 CD72P21854 359 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 RPL10P27635 214 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 NTSR1P30989 418 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAT2AP31153 395 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 CASP2P42575 452 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 KCNK10P57789 538 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PRKG2Q13237 762 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 DOC2AQ14183 400 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 IRF4Q15306 451 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 SF1Q15637 639 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TLDC1Q6P9B6 456 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 AAGABQ6PD74 315 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TTC23LQ6PF05 361 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 MAMSTRQ6ZN01 415 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 RNF165Q6ZSG1 346 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 LIX1Q8N485 282 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR2T3Q8NH03 318 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 OR14C36Q8NHC7 312 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 N4BP2L2Q92802 583 aaPredicted RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 NEIL2Q969S2 332 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 ASB9Q96DX5 294 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 EGLN2Q96KS0 407 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 PPP3R2Q96LZ3 170 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 TMEM74Q96NL1 305 aa8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 MTERF1Q99551 399 aaKnown RBP8.57□□□□□ -1.04
CDC42SE1-204ENST00000483763 SLC29A3Q9BZD2 475 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms