RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 TSPAN12O95859 305 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 CTAGE8P0CG41 777 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 MCM3P25205 808 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 OAS2P29728 719 aaKnown RBP17.35■□□□□ 0.37
HDAC6-225ENST00000483506 SSTR1P30872 391 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 RGS4P49798 205 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 GUCY2DQ02846 1103 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 GLE1Q53GS7 698 aaKnown RBP17.35■□□□□ 0.37
HDAC6-225ENST00000483506 PAQR3Q6TCH7 311 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 C6orf15Q6UXA7 325 aaPredicted RBP17.35■□□□□ 0.37
HDAC6-225ENST00000483506 STRA8Q7Z7C7 330 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 CTAGE6Q86UF2 777 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 SPNS2Q8IVW8 549 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 CTAGE4Q8IX94 777 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 LRFN5Q96NI6 719 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 PKP4Q99569 1192 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 OLFM1Q99784 485 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 KLHL25Q9H0H3 589 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 FAM60AQ9NP50 221 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 SMYD2Q9NRG4 433 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 FAM159BA6NKW6 160 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 TERTO14746 1132 aaKnown RBP17.34■□□□□ 0.37
HDAC6-225ENST00000483506 SLC16A5O15375 505 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 CPNE3O75131 537 aaKnown RBP17.34■□□□□ 0.37
HDAC6-225ENST00000483506 C8GP07360 202 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 LIFP15018 202 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 WT1P19544 449 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-225ENST00000483506 MAGEA4P43358 317 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 GPX6P59796 221 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 SP140Q13342 867 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 ARHGAP40Q5TG30 622 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 KIAA1614Q5VZ46 1190 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 TAX1BP1Q86VP1 789 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 DNAJC22Q8N4W6 341 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 C2orf73Q8N5S3 287 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-225ENST00000483506 GPATCH11Q8N954 259 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 GALNT6Q8NCL4 622 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 OR1L3Q8NH93 324 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 EEF1AKMT1Q8WVE0 214 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 EFHD1Q9BUP0 239 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 RHOJQ9H4E5 214 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 ENAMQ9NRM1 1142 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 INTS7Q9NVH2 962 aaKnown RBP17.34■□□□□ 0.37
HDAC6-225ENST00000483506 DMGDHQ9UI17 866 aaKnown RBP17.34■□□□□ 0.37
HDAC6-225ENST00000483506 PCDHGA4Q9Y5G9 962 aa17.34■□□□□ 0.37
HDAC6-225ENST00000483506 CACNA1GO43497 2377 aa17.33■□□□□ 0.37
HDAC6-225ENST00000483506 LOC101059948A0A1B0GTJ6 334 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF839A8K0R7 811 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 TMEM150CB9EJG8 249 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 ZBTB14O43829 449 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 SCRG1O75711 98 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 SLC16A8O95907 504 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 MAGP20916 626 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 PNLIPRP1P54315 467 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 ITGA1P56199 1179 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 PDAP1Q13442 181 aaKnown RBP17.33■□□□□ 0.36
HDAC6-225ENST00000483506 FASTKQ14296 549 aaKnown RBP17.33■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF517Q6ZMY9 492 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-225ENST00000483506 C3orf62Q6ZUJ4 267 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 LRRC56Q8IYG6 542 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-225ENST00000483506 CEP112Q8N8E3 955 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 OR2A1Q8NGT9 310 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 SMPDL3AQ92484 453 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 CDKL2Q92772 493 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 DLG3Q92796 817 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 ZUFSPQ96AP4 578 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 PDLIM5Q96HC4 596 aaKnown RBP17.33■□□□□ 0.36
HDAC6-225ENST00000483506 SLC45A3Q96JT2 553 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 SLC12A9Q9BXP2 914 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 LRRC4CQ9HCJ2 640 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 SERTAD3Q9UJW9 196 aa17.33■□□□□ 0.36
HDAC6-225ENST00000483506 ATMQ13315 3056 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 PCM1Q15154 2024 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 FAM95CA0A1B0GW59 222 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 CXorf49A8MYA2 514 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-225ENST00000483506 TARM1B6A8C7 271 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 E7ENX8 843 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 HCRTR1O43613 425 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF37AP17032 561 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-225ENST00000483506 IL2P60568 153 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 TAP2Q03519 686 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 SF1Q15637 639 aaKnown RBP17.32■□□□□ 0.36
HDAC6-225ENST00000483506 FCRL6Q6DN72 434 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 CAPN12Q6ZSI9 719 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 UBE2R2Q712K3 238 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-225ENST00000483506 CCDC25Q86WR0 208 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 RELL1Q8IUW5 271 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 TMEM126BQ8IUX1 230 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 FAM20CQ8IXL6 584 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 MYO1HQ8N1T3 1032 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 OR2L3Q8NG85 312 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 ZNF480Q8WV37 535 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 KIAA1143Q96AT1 154 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-225ENST00000483506 LINGO1Q96FE5 620 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 VPS39Q96JC1 886 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 CPNE1Q99829 537 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 GPN2Q9H9Y4 310 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-225ENST00000483506 LHX9Q9NQ69 397 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 ADAMTS6Q9UKP5 1117 aa17.32■□□□□ 0.36
HDAC6-225ENST00000483506 PADI1Q9ULC6 663 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms