RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 TUBB2BQ9BVA1 445 aa6.48□□□□□ -1.37
CLK1-212ENST00000482590 SCNM1Q9BWG6 230 aa6.48□□□□□ -1.37
CLK1-212ENST00000482590 BBS2Q9BXC9 721 aa6.48□□□□□ -1.37
CLK1-212ENST00000482590 TEX101Q9BY14 249 aa6.48□□□□□ -1.37
CLK1-212ENST00000482590 BEX4Q9NWD9 120 aaPredicted RBP6.48□□□□□ -1.37
CLK1-212ENST00000482590 HMGXB4Q9UGU5 601 aa6.48□□□□□ -1.37
CLK1-212ENST00000482590 TBC1D30Q9Y2I9 924 aa6.48□□□□□ -1.37
CLK1-212ENST00000482590 BAHCC1Q9P281 2608 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ACACAQ13085 2346 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 IGHV1OR15-9A0A0B4J2B8 117 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 GAGE12BA1L429 117 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 GAGE12HA6NDE8 117 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 MEI4A8MW99 385 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 PDXKO00764 312 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 DHHO43323 396 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CALUO43852 315 aaPredicted RBP6.47□□□□□ -1.37
CLK1-212ENST00000482590 RECQL5O94762 991 aaPredicted RBP6.47□□□□□ -1.37
CLK1-212ENST00000482590 VNN1O95497 513 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 IFNB1P01574 187 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 HLA-DRAP01903 254 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 NR3C1P04150 777 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 SERPINF2P08697 491 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 RALAP11233 206 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 GNSP15586 552 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 TMEM11P17152 192 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CD58P19256 250 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 TNFRSF8P28908 595 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CPA2P48052 419 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 NPY4RP50391 375 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 WNT3P56703 355 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CTXN1P60606 82 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ARF5P84085 180 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ATP1A4Q13733 1029 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 HNRNPDQ14103 355 aaKnown RBP6.47□□□□□ -1.37
CLK1-212ENST00000482590 RCN2Q14257 317 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CBWD5Q5RIA9 395 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 RESP18Q5W5W9 173 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 SPOPLQ6IQ16 392 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 TTI2Q6NXR4 508 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ZDHHC24Q6UX98 284 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 PAQR9Q6ZVX9 377 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 RD3Q7Z3Z2 195 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 TMEM25Q86YD3 366 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CNTN4Q8IWV2 1026 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 MINDY1Q8N5J2 469 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 KIAA0895Q8NCT3 520 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 KIAA1524Q8TCG1 905 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 LINC00476Q8WZB0 136 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ERLEC1Q96DZ1 483 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CFAP36Q96G28 342 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 SMOQ99835 787 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ZPBPQ9BS86 351 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 MLPHQ9BV36 600 aaPredicted RBP6.47□□□□□ -1.37
CLK1-212ENST00000482590 SDCBP2Q9H190 292 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 CSNK1G1Q9HCP0 422 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 TMEM74BQ9NUR3 256 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 IL37Q9NZH6 218 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 DKK4Q9UBT3 224 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ZMAT5Q9UDW3 170 aaKnown RBP6.47□□□□□ -1.37
CLK1-212ENST00000482590 FETUBQ9UGM5 382 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ANAPC2Q9UJX6 822 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 PILRBQ9UKJ0 227 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 PCDHA7Q9UN72 937 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 TMED5Q9Y3A6 229 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 PCDHGA1Q9Y5H4 931 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 RAD54BQ9Y620 910 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 ZZEF1O43149 2961 aa6.47□□□□□ -1.37
CLK1-212ENST00000482590 MYLKQ15746 1914 aa6.46□□□□□ -1.37
CLK1-212ENST00000482590 GOLGA4Q13439 2230 aaKnown RBP6.46□□□□□ -1.37
CLK1-212ENST00000482590 CABIN1Q9Y6J0 2220 aa6.46□□□□□ -1.37
CLK1-212ENST00000482590 SPAARA0A1B0GVQ0 90 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 PRSS29PA6NIE9 313 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 MDM4O15151 490 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 KLRC4O43908 158 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 TOP3BO95985 862 aaKnown RBP6.46□□□□□ -1.38
CLK1-212ENST00000482590 ASS1P00966 412 aaKnown RBP6.46□□□□□ -1.38
CLK1-212ENST00000482590 VIPP01282 170 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 TUBBP07437 444 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 DDCP20711 480 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 MCM3P25205 808 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 ATRXP46100 2492 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 VAMP7P51809 220 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 CDH15P55291 814 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 TUBB4BP68371 445 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 SIM1P81133 766 aaPredicted RBP6.46□□□□□ -1.38
CLK1-212ENST00000482590 NHLH2Q02577 135 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 DUSP2Q05923 314 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 INCA1Q0VD86 236 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 NPRL3Q12980 569 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 PDCLQ13371 301 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 ARHGEF7Q14155 803 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 MST1LQ2TV78 715 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 CCDC40Q4G0X9 1142 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 C10orf120Q5SQS8 335 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 ATXN7L2Q5T6C5 722 aaPredicted RBP6.46□□□□□ -1.38
CLK1-212ENST00000482590 ATL3Q6DD88 541 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 FCRL6Q6DN72 434 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 DENND1BQ6P3S1 775 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 SARM1Q6SZW1 724 aa6.46□□□□□ -1.38
CLK1-212ENST00000482590 INTS8Q75QN2 995 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms