RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PADI2Q9Y2J8 665 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PTRH2Q9Y3E5 179 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 MAD1L1Q9Y6D9 718 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 CTAGE9A4FU28 777 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 ARHGEF33A8MVX0 844 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 CNOT3O75175 753 aaKnown RBP10.06□□□□□ -0.8
CPSF4-212ENST00000482251 BANF1O75531 89 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 S1PR4O95977 384 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 RECKO95980 971 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 ESR1P03372 595 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 HBQ1P09105 142 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 ALAS2P22557 587 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 FOLR3P41439 243 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 SLC1A2P43004 574 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 MAGEA6P43360 314 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 MLLT10P55197 1068 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 YBX1P67809 324 aaKnown RBP10.06□□□□□ -0.8
CPSF4-212ENST00000482251 CTBP1Q13363 440 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 CYP1B1Q16678 543 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 NADK2Q4G0N4 442 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 ANKRD20A4Q4UJ75 823 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 FCRL6Q6DN72 434 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 NEPROQ6NW34 567 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 FIGLAQ6QHK4 219 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 TTLL10Q6ZVT0 673 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 MRGPREQ86SM8 312 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 REXO1L1PQ8IX06 675 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 GIMAP7Q8NHV1 300 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 PROKR1Q8TCW9 393 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 DENND1AQ8TEH3 1009 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 RAD51AP1Q96B01 352 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 FOPNLQ96NB1 174 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 NDC1Q9BTX1 674 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 RAB11FIP5Q9BXF6 653 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 ABCF3Q9NUQ8 709 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 SRPK3Q9UPE1 567 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 AP1M2Q9Y6Q5 423 aa10.06□□□□□ -0.8
CPSF4-212ENST00000482251 MED13Q9UHV7 2174 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 RELNP78509 3460 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 A0A0J9YVX5 310 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 GOLGA6L10A0A0M3HER8 536 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 FAM237BA0A1B0GVD1 139 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 SDR42E2A6NKP2 422 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 USP27XA6NNY8 438 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 KPNA5O15131 536 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 PFDN6O15212 129 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 CTSVO60911 334 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 ALOX12BO75342 701 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 KLF7O75840 302 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 USP1O94782 785 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 PKMP14618 531 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 ITGAXP20702 1163 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 VSX2P58304 361 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 DCDP81605 110 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 FOXK1P85037 733 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 MPP1Q00013 466 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 THOC5Q13769 683 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 PPP1R7Q15435 360 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 KLHL38Q2WGJ6 581 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 NKAIN1Q4KMZ8 207 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 TLDC1Q6P9B6 456 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 SUSD1Q6UWL2 747 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 SHISA6Q6ZSJ9 500 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 RAB43Q86YS6 212 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 MCATQ8IVS2 390 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 RAB42Q8N4Z0 105 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 PPFIBP2Q8ND30 876 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 FDCSPQ8NFU4 85 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 OR2L3Q8NG85 312 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 SLC22A18Q96BI1 424 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 NAP1L3Q99457 506 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 DPH2Q9BQC3 489 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 SELENOSQ9BQE4 189 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 NUDT9Q9BW91 350 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 MFRPQ9BY79 579 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 DDX47Q9H0S4 455 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 XAB2Q9HCS7 855 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 C20orf96Q9NUD7 363 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 INTS7Q9NVH2 962 aaKnown RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 STOX2Q9P2F5 926 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-212ENST00000482251 ASIC3Q9UHC3 531 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 SNX12Q9UMY4 172 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 NEU2Q9Y3R4 380 aa10.05□□□□□ -0.8
CPSF4-212ENST00000482251 CCDC88CQ9P219 2028 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 ZCWPW2A0A1B0GU75 182 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 A0A1B0GX78 115 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 A0A1W2PPV9 198 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 H3BMM5 538 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 SYF2O95926 243 aaKnown RBP10.04□□□□□ -0.8
CPSF4-212ENST00000482251 EIF2S1P05198 315 aaKnown RBP10.04□□□□□ -0.8
CPSF4-212ENST00000482251 MLNP12872 115 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CCNFP41002 786 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 MAGEA3P43357 314 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 FNTAP49354 379 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CLCN7P51798 805 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 GBX1Q14549 363 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 LONRF1Q17RB8 773 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 FRMPD2BQ6IN97 320 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 ZNF549Q6P9A3 640 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms