RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 VIPP01282 170 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 C8GP07360 202 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 MAP4P27816 1152 aaKnown RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 GLRBP48167 497 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 CCT5P48643 541 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 PRKG2Q13237 762 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 ACAP2Q15057 778 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 TNFAIP8L3Q5GJ75 292 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 DUS1LQ6P1R4 473 aaKnown RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 TTC23LQ6PF05 361 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 UNC5DQ6UXZ4 953 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 DBX2Q6ZNG2 339 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 UBE2R2Q712K3 238 aaPredicted RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 CLEC14AQ86T13 490 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 EXOC3L1Q86VI1 746 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 SPERTQ8NA61 448 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 GPR156Q8NFN8 814 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 OR5AR1Q8NGP9 310 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 OR5K2Q8NHB8 316 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 SLC37A2Q8TED4 501 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 SETD7Q8WTS6 366 aaKnown RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 YIPF3Q9GZM5 350 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 TRIT1Q9H3H1 467 aaKnown RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 CPNE7Q9UBL6 633 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 ADAMTS6Q9UKP5 1117 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
HPS4-212ENST00000481910 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.27□□□□□ -0.61
HPS4-212ENST00000481910 ASCC3Q8N3C0 2202 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 PRAMEF33A0A0G2JMD5 474 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 NPEPPSL1A6NEC2 478 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 GFYI3L273 518 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 COPEO14579 308 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 FLRT2O43155 660 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 C1orf105O95561 183 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 CATP04040 527 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 RPN2P04844 631 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 VIMP08670 466 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 TFEBP19484 476 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 NDUFS1P28331 727 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 CCNFP41002 786 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 GRK6P43250 576 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 MAZP56270 477 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 HHEXQ03014 270 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 SLC18A2Q05940 514 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 TSNQ15631 228 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 INAVAQ3KP66 663 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 C14orf28Q4W4Y0 310 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 ISCA2Q86U28 154 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 TBC1D21Q8IYX1 336 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 ARL14Q8N4G2 192 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 KYQ8NBH2 561 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 STAG3L4Q8TBR4 150 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 MCOLN3Q8TDD5 553 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 RHBDD1Q8TEB9 315 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 KIAA1191Q96A73 305 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 ARL8AQ96BM9 186 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 PTERQ96BW5 349 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 APOLD1Q96LR9 279 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 GPR78Q96P69 363 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 SH3GL2Q99962 352 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 SLC12A9Q9BXP2 914 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 TRIM54Q9BYV2 358 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 ALG2Q9H553 416 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 TFB2MQ9H5Q4 396 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 STN1Q9H668 368 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 ALG9Q9H6U8 611 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 MVB12BQ9H7P6 319 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 SLC40A1Q9NP59 571 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 POT1Q9NUX5 634 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 BTBD3Q9Y2F9 522 aa11.26□□□□□ -0.61
HPS4-212ENST00000481910 TDRKHQ9Y2W6 561 aaKnown RBP11.26□□□□□ -0.61
HPS4-212ENST00000481910 SLC16A5O15375 505 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 NDUFB5O43674 189 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 SPAG7O75391 227 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 SYF2O95926 243 aaKnown RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 GSTA1P08263 222 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 HIST1H2AGP0C0S8 130 aaPredicted RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 CD59P13987 128 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 CREB1P16220 341 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 HIST1H2ADP20671 130 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 CYP2A7P20853 494 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 ALDH3A1P30838 453 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 BDKRB1P46663 353 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 RPIAP49247 311 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 VAC14Q08AM6 782 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 SP140Q13342 867 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 SPCS2Q15005 226 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 SBSNQ6UWP8 590 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 ADAMTSL2Q86TH1 951 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 C17orf82Q86X59 251 aaPredicted RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 SLC35F3Q8IY50 421 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 TMCO5AQ8N6Q1 288 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 BANPQ8N9N5 519 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 AVL9Q8NBF6 648 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 SGCDQ92629 289 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 DLG3Q92796 817 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 ALKBH8Q96BT7 664 aaKnown RBP11.25□□□□□ -0.61
HPS4-212ENST00000481910 SDCCAG3Q96C92 435 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 HIST1H2AHQ96KK5 128 aa11.25□□□□□ -0.61
HPS4-212ENST00000481910 HIST1H2AJQ99878 128 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms