RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CPZQ66K79 652 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 LINC00299Q6ZSB3 139 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 GOLGA7Q7Z5G4 137 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 MILR1Q7Z6M3 343 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 GALNT10Q86SR1 603 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 AKAP14Q86UN6 197 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CCDC71Q8IV32 467 aaPredicted RBP13□□□□□ -0.33
PDZRN3-208ENST00000479530 POC5Q8NA72 575 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 MCFD2Q8NI22 146 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 OSGIN1Q9UJX0 560 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 CCL27Q9Y4X3 112 aa13□□□□□ -0.33
PDZRN3-208ENST00000479530 C2orf78A6NCI8 922 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 DLGAP3O95886 979 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 MYCLP1P12525 358 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 CTPS1P17812 591 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ST13P50502 369 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 PRSS36Q5K4E3 855 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ALG1LQ6GMV1 187 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 LRRC8DQ7L1W4 858 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 GPR149Q86SP6 731 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 PCSK9Q8NBP7 692 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 KAT8Q9H7Z6 458 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 OR6C75A6NL08 312 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 SNPHO15079 494 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 PGRP06401 933 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 JUNDP17535 347 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 MZF1P28698 734 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ATP5C1P36542 298 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ARF5P84085 180 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 GTF2H3Q13889 308 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 SOWAHCQ53LP3 525 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ATXN7L2Q5T6C5 722 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 RNF219Q5W0B1 726 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 THOC7Q6I9Y2 204 aaKnown RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ANKRD46Q86W74 232 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 PLD3Q8IV08 490 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 MICU2Q8IYU8 434 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 ZHX1-C8orf76Q96EF9 292 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 TP63Q9H3D4 680 aaPredicted RBP12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 OPTCQ9UBM4 332 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 DNMT3LQ9UJW3 386 aa12.99□□□□□ -0.33
PDZRN3-208ENST00000479530 PLXNA3P51805 1871 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 EFCAB9A8MZ26 197 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 K7ERQ8 282 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 KDELR3O43731 214 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RFPL2O75678 378 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 GALTP07902 379 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 CST5P28325 142 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 GKP32189 559 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 LIPAP38571 399 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 GDF5P43026 501 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 IL2P60568 153 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 PHC1P78364 1004 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SEMG2Q02383 582 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 CDC20Q12834 499 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RUNDC3AQ59EK9 446 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SGO1Q5FBB7 561 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SUSD1Q6UWL2 747 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 AHSA2Q719I0 299 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TAS2R42Q7RTR8 314 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF551Q7Z340 670 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 CYP2U1Q7Z449 544 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 NKAPQ8N5F7 415 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 AADATQ8N5Z0 425 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TXNDC15Q96J42 360 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 C6orf62Q9GZU0 229 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 MAGEH1Q9H213 219 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 MARCH7Q9H992 704 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TMEM161AQ9NX61 479 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 QPCTLQ9NXS2 382 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TRMT6Q9UJA5 497 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 IFT52Q9Y366 437 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ZNF840PA6NDX5 716 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 A8MX80 341 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 NUAK1O60285 661 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 STC2O76061 302 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 GUCA1CO95843 209 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 RHOCP08134 193 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ALPIP09923 528 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 ITGAMP11215 1152 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 PKMP14618 531 aaKnown RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 MSH3P20585 1137 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 S100A1P23297 94 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 OR1D2P34982 312 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 KRT20P35900 424 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 NRIP1P48552 1158 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 MVKQ03426 396 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SLC14A1Q13336 389 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 TAF1AQ15573 450 aaPredicted RBP12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 DESI1Q6ICB0 168 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SPATC1Q76KD6 591 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 LIX1Q8N485 282 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 SPATA17Q96L03 361 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 BCL7BQ9BQE9 202 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 DCSTAMPQ9H295 470 aa12.98□□□□□ -0.33
PDZRN3-208ENST00000479530 CPNE5Q9HCH3 593 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms