RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 NSG1P42857 185 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 BMXP51813 675 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 RPS14P62263 151 aaKnown RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 DDX39BQ13838 428 aaKnown RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 CCSMST1Q4G0I0 132 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 LAIR2Q6ISS4 152 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 CES5AQ6NT32 575 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 TCEAL8Q8IYN2 117 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 ZNF366Q8N895 744 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 SDCCAG3Q96C92 435 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 SCRN2Q96FV2 425 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 CORO1BQ9BR76 489 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 LINC00597Q9H2U6 94 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 SUV39H2Q9H5I1 410 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 BRD9Q9H8M2 597 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 FAM118AQ9NWS6 357 aa10.53□□□□□ -0.72
VPS52-217ENST00000478934 PAK1IP1Q9NWT1 392 aaPredicted RBP10.53□□□□□ -0.72
VPS52-217ENST00000478934 LEFTY2O00292 366 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 SDC1P18827 310 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 CRHBPP24387 322 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 ITGB8P26012 769 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 PTPN6P29350 595 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 WEE1P30291 646 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 PLA2G16P53816 162 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 DEFB115Q30KQ5 88 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 GALNT18Q6P9A2 607 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 ZNF773Q6PK81 442 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 DHRS4L2Q6PKH6 230 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 TPRG1Q6ZUI0 275 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 SLC15A4Q8N697 577 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 OR7A2PQ8NGA2 310 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 OR13F1Q8NGS4 319 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 TCEAL4Q96EI5 215 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 CEP295NLQ96MC4 621 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 DPH2Q9BQC3 489 aaPredicted RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 SLC32A1Q9H598 525 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 ELOVL6Q9H5J4 265 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 GORASP2Q9H8Y8 452 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 ZDHHC3Q9NYG2 299 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 KIAA1522Q9P206 1035 aaPredicted RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 TRPS1Q9UHF7 1281 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 HCFC2Q9Y5Z7 792 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 COL4A6Q14031 1691 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 TRBV5-3A0A0A0MS03 114 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 SH3PXD2BA1X283 911 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 NEDD8-MDP1E9PL57 170 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 YY2O15391 372 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 CCL16O15467 120 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 TULP3O75386 442 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 INMTO95050 263 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 IL6P05231 212 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 CD22P20273 847 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 AOAHP28039 575 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 GZMMP51124 257 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 CASP9P55211 416 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 CD47Q08722 323 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 VAC14Q08AM6 782 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 FOXD4Q12950 439 aaPredicted RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 ABRQ12979 859 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 SPCS2Q15005 226 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 DPY19L1Q2PZI1 675 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 C22orf39Q6P5X5 142 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 C16orf87Q6PH81 154 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 DOK6Q6PKX4 331 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 THAP5Q7Z6K1 395 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 MICU2Q8IYU8 434 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 C8orf59Q8N0T1 100 aaPredicted RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 SPARTQ8N0X7 666 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 FIBINQ8TAL6 211 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 MRPS31Q92665 395 aaKnown RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 MTERF1Q99551 399 aaKnown RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 KCTD5Q9NXV2 234 aa10.52□□□□□ -0.73
VPS52-217ENST00000478934 LSM7Q9UK45 103 aaKnown RBP10.52□□□□□ -0.73
VPS52-217ENST00000478934 KCNE1BA0A087WTH5 132 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 AGAP14A8MT82 685 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 SOCS5O75159 536 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 ZNF682O95780 498 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 ACRP10323 421 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CCNA2P20248 432 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 MSH3P20585 1137 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 S100A3P33764 101 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 HALP42357 657 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 C21orf59P57076 290 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 AQP6Q13520 282 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 SIM2Q14190 667 aaPredicted RBP10.51□□□□□ -0.73
VPS52-217ENST00000478934 GPR33Q49SQ1 333 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 MPPE1Q53F39 396 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CARD16Q5EG05 197 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 Q6ZVL8 140 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 HTR3DQ70Z44 454 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 HSD11B1LQ7Z5J1 315 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 TMC8Q8IU68 726 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 FAM217AQ8IXS0 508 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 SMYD1Q8NB12 490 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CHDHQ8NE62 594 aaPredicted RBP10.51□□□□□ -0.73
VPS52-217ENST00000478934 CYB5D2Q8WUJ1 264 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 FAM120BQ96EK7 910 aaKnown RBP10.51□□□□□ -0.73
VPS52-217ENST00000478934 PLEKHA8Q96JA3 519 aa10.51□□□□□ -0.73
VPS52-217ENST00000478934 CPPED1Q9BRF8 314 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms