RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 ACKR2O00590 384 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ADAM10O14672 748 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NCK2O43639 380 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ARL6IP5O75915 188 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 AHSA1O95433 338 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 GCGP01275 180 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NUDT7P0C024 238 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SMIM17P0DL12 118 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 BGNP21810 368 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PTPN4P29074 926 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CHRNDQ07001 517 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CCINQ13939 588 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MSMO1Q15800 293 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 FUT11Q495W5 492 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ZMAT1Q5H9K5 638 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NCEH1Q6PIU2 408 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 HHIPL2Q6UWX4 724 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 C12orf43Q96C57 262 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 COG8Q96MW5 612 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 UHRF2Q96PU4 802 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 BCAS3Q9H6U6 928 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TAS2R10Q9NYW0 307 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 KIF13AQ9H1H9 1805 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MYH1P12882 1939 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MYH4Q9Y623 1939 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CEMIPQ8WUJ3 1361 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 C22orf31O95567 290 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MBP02144 154 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 HNRNPLP14866 589 aaKnown RBP eCLIP5.33□□□□□ -1.56
USF3-202ENST00000478658 F2RP25116 425 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MMP12P39900 470 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SLC6A9P48067 706 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NR1H2P55055 460 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MANFP55145 182 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 INHBEP58166 350 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ACTBP60709 375 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ACTG1P63261 375 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 POU4F2Q12837 409 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ZNF155Q12901 538 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 SERINC3Q13530 473 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 IDO2Q6ZQW0 420 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 USP43Q70EL4 1123 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TMPRSS6Q8IU80 811 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TTPALQ9BTX7 342 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SH3BGRL3Q9H299 93 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 VNN3Q9NY84 501 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CPA4Q9UI42 421 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CCDC88AQ3V6T2 1871 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RGS12O14924 1447 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ESYT3A0FGR9 886 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ERVV-1B6SEH8 477 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 BHLHE40O14503 412 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ATMINO43313 823 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 GPR137BO60478 399 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MED6O75586 246 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PRAMEF1O95521 474 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 NFATC1O95644 943 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TSPAN15O95858 294 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 S100A8P05109 93 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ITGA5P08648 1049 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 USP17L7P0C7H9 530 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RBMXP38159 391 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 EIF2DP41214 584 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 GNG2P59768 71 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 MXD1Q05195 221 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PPP3CAQ08209 521 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 LCP2Q13094 533 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PRAMEF14Q5SWL7 426 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 STEAP3Q658P3 488 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 DUPD1Q68J44 220 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TXNDC8Q6A555 127 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CAPN13Q6MZZ7 669 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 RBMS3Q6XE24 437 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 TRIM74Q86UV6 250 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 TRIM73Q86UV7 250 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 CD163Q86VB7 1156 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ARSGQ96EG1 525 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 OR2M4Q96R27 311 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 URM1Q9BTM9 101 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 ALG12Q9BV10 488 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 GTPBP2Q9BX10 602 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 NXF3Q9H4D5 531 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 MRPL17Q9NRX2 175 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 ETAA1Q9NY74 926 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PCDHB1Q9Y5F3 818 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 EVPLQ92817 2033 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PIGRP01833 764 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ORM2P19652 201 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 UGT1A1P22309 533 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 RORCP51449 518 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 OR4D2P58180 307 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 PSMA6P60900 246 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 RAB11AP62491 216 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 DYNLL1P63167 89 aaKnown RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 CRADDP78560 199 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 SCARB2Q14108 478 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 DPY19L1Q2PZI1 675 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ZNF572Q7Z3I7 529 aaPredicted RBP5.33□□□□□ -1.56
USF3-202ENST00000478658 TOP6BLQ8N6T0 577 aa5.33□□□□□ -1.56
USF3-202ENST00000478658 ATAD1Q8NBU5 361 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms