RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 KRT83P78385 493 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF234Q14588 700 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 PTPRCAPQ14761 206 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 HYAL4Q2M3T9 481 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 ERN2Q76MJ5 926 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 MAP7D3Q8IWC1 876 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 DCUN1D3Q8IWE4 304 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 ZNF595Q8IYB9 648 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 THNSL1Q8IYQ7 743 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 EXD1Q8NHP7 514 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 PPP4R1Q8TF05 950 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 SLC38A5Q8WUX1 472 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 ATL1Q8WXF7 558 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 BICD1Q96G01 975 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 SPATA17Q96L03 361 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 FER1L6-AS2Q96M78 137 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 TTC14Q96N46 770 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 LRRC3BQ96PB8 259 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 ADPGKQ9BRR6 497 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 C16orf70Q9BSU1 422 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 NUP85Q9BW27 656 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 OPA3Q9H6K4 179 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 HHATLQ9HCP6 504 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 PRMT7Q9NVM4 692 aaPredicted RBP3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 ANAPC5Q9UJX4 755 aa3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 NOL7Q9UMY1 257 aaKnown RBP3.85□□□□□ -1.79
CDC42BPA-212ENST00000478573 LRRC37AA6NMS7 1700 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 A0A1W2PPM1 405 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 ANKRD66B4E2M5 251 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 TSPAN1O60635 241 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 WISP2O76076 250 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 SLCO2B1O94956 709 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 PMS2P2O95744 297 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 MYOD1P15172 320 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 ERCC2P18074 760 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 LIMK1P53667 647 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 ARL16Q0P5N6 197 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 DLG1Q12959 904 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 CAMK2DQ13557 499 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 RBM39Q14498 530 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 ALS2CLQ60I27 953 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 FIGLAQ6QHK4 219 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 GFRALQ6UXV0 394 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 C9orf139Q6ZV77 190 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 GALNTL5Q7Z4T8 443 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 CENPVQ7Z7K6 275 aaPredicted RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 TMEM173Q86WV6 379 aaPredicted RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 OR52I2Q8NH67 350 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 MOSPD2Q8NHP6 518 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 KIF18AQ8NI77 898 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 CD101Q93033 1021 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 TMEM19Q96HH6 336 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 PRMT6Q96LA8 375 aaPredicted RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 OLFM1Q99784 485 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 WNT5BQ9H1J7 359 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 CNOT10Q9H9A5 744 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 MBNL1Q9NR56 388 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 YIPF1Q9Y548 306 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 PDS5AQ29RF7 1337 aaKnown RBP3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 C10orf71Q711Q0 1435 aa3.84□□□□□ -1.79
CDC42BPA-212ENST00000478573 SPEF2Q9C093 1822 aa3.84□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZCWPW2A0A1B0GU75 182 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 FEZF1A0PJY2 475 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 MAGEA13PA6NCF6 341 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR5K3A6NET4 321 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 ANKUB1A6NFN9 424 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF587BE7ETH6 402 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 OR10H2O60403 315 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 LDLRP01130 860 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 FAM106CPP0CH98 169 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 GM2AP17900 193 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 DNASE1P24855 282 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 HOXC8P31273 242 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 PCGF2P35227 344 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 GP5P40197 560 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 CCR10P46092 362 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 EEF1A1P68104 462 aaKnown RBP3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 COG7P83436 770 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TROAPQ12815 778 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 BFSP1Q12934 665 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 HSPB3Q12988 150 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TNIP1Q15025 636 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 VWC2Q2TAL6 325 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 CCDC184Q52MB2 194 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TMEM35AQ53FP2 167 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 RNASEH2BQ5TBB1 312 aaKnown RBP3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 C6orf163Q5TEZ5 329 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 EEF1A1P5Q5VTE0 462 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 PLA2G4FQ68DD2 849 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZNF530Q6P9A1 599 aaPredicted RBP3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TMEM219Q86XT9 240 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 NAGSQ8N159 534 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 TTC30BQ8N4P2 665 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLC20A1Q8WUM9 679 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 SMPDL3BQ92485 455 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 MRPS27Q92552 414 aaKnown RBP3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 CFAP53Q96M91 514 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 UHRF2Q96PU4 802 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 SLA2Q9H6Q3 261 aa3.83□□□□□ -1.8
CDC42BPA-212ENST00000478573 ZWILCHQ9H900 591 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms