RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SPATA7Q9P0W8 599 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 DKK4Q9UBT3 224 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 LNPEPQ9UIQ6 1025 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 KLHL20Q9Y2M5 609 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PCDHB11Q9Y5F2 797 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 IKBKGQ9Y6K9 419 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SEC16AO15027 2179 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 A0A0J9YY10 115 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 B4E171 279 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MYO1CO00159 1063 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TAF4O00268 1085 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MAP3K7O43318 606 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SLU7O95391 586 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 GUCA1CO95843 209 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CAPNS1P04632 268 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 C8GP07360 202 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 STMN1P16949 149 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MAGP20916 626 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TSPAN7P41732 249 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PMS2P54278 862 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PNLIPRP1P54315 467 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MC2RQ01718 297 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SP140Q13342 867 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 COL9A2Q14055 689 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SF1Q15637 639 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PHKG1Q16816 387 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 DEFB110Q30KQ9 67 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TMTC4Q5T4D3 741 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 GRTP1Q5TC63 336 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 THEMIS2Q5TEJ8 643 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MROH9Q5TGP6 573 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 IGF2-ASQ6U949 168 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TMEM207Q6UWW9 146 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CEACAM20Q6UY09 585 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CYHR1Q6ZMK1 362 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 RAPH1Q70E73 1250 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CLEC14AQ86T13 490 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ZFAND4Q86XD8 727 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 RELL1Q8IUW5 271 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SPATA6LQ8N4H0 392 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 C19orf47Q8N9M1 422 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 KDF1Q8NAX2 398 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MCOLN3Q8TDD5 553 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ANKRD49Q8WVL7 239 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 DLG3Q92796 817 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 N4BP2L2Q92802 583 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ALKBH8Q96BT7 664 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TSPAN17Q96FV3 270 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MED8Q96G25 268 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SLC41A2Q96JW4 573 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TRAPPC9Q96Q05 1148 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MIPEPQ99797 713 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PITPNM3Q9BZ71 974 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ASPSCR1Q9BZE9 553 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ULBP3Q9BZM4 244 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ANKZF1Q9H8Y5 726 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FANCEQ9HB96 536 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PDE7BQ9NP56 450 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 UTP6Q9NYH9 597 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PDE10AQ9Y233 779 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FER1L5A0AVI2 2057 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 A0A087WUV0 522 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 EXOC1LA0A1B0GW35 172 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF839A8K0R7 811 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 TMEM150CB9EJG8 249 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 POC1B-GALNT4F8VUJ3 575 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 GFYI3L273 518 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 CDC7O00311 574 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 NVLO15381 856 aaKnown RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 RRP8O43159 456 aaKnown RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 INHBAP08476 426 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 HIST1H2AGP0C0S8 130 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 CCDC166P0CW27 439 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 HIST1H2ADP20671 130 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 RPA3P35244 121 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 GMPRP36959 345 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 RAB10P61026 200 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 TUBB4BP68371 445 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 SLC5A12Q1EHB4 618 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 FRA10AC1Q70Z53 315 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 PPP1R3BQ86XI6 285 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 KMT5CQ86Y97 462 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 CARFQ8N187 725 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 D2HGDHQ8N465 521 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 NKAPQ8N5F7 415 aaKnown RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF248Q8NDW4 579 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 SNIP1Q8TAD8 396 aaKnown RBP6.65□□□□□ -1.34
BRCA1-215ENST00000478531 FLVCR1-AS1Q8TAF5 88 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF480Q8WV37 535 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 KCNE4Q8WWG9 221 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 SLC22A18Q96BI1 424 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 HIST1H2AHQ96KK5 128 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 PAFAH2Q99487 392 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 HIST1H2AJQ99878 128 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 H2AFJQ9BTM1 129 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 DDA1Q9BW61 102 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 PARVBQ9HBI1 364 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 FBXO8Q9NRD0 319 aa6.65□□□□□ -1.34
BRCA1-215ENST00000478531 FGF21Q9NSA1 209 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms