RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 ELFN2Q5R3F8 820 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 RNLSQ5VYX0 342 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 KIAA0930Q6ICG6 404 aaPredicted RBP2.31□□□□□ -2.04
HPS3-205ENST00000478525 IGFL3Q6UXB1 125 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 CCBE1Q6UXH8 406 aaPredicted RBP2.31□□□□□ -2.04
HPS3-205ENST00000478525 RTL3Q8N8U3 475 aaKnown RBP2.31□□□□□ -2.04
HPS3-205ENST00000478525 MOSPD2Q8NHP6 518 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 SERAC1Q96JX3 654 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 B3GALT6Q96L58 329 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 FAM218AQ96MZ4 157 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 RAD9AQ99638 391 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 NCAPGQ9BPX3 1015 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 FNDC11Q9BVV2 318 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 PPIL3Q9H2H8 161 aaKnown RBP2.31□□□□□ -2.04
HPS3-205ENST00000478525 PDCL3Q9H2J4 239 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 B3GAT1Q9P2W7 334 aa2.31□□□□□ -2.04
HPS3-205ENST00000478525 LRRFIP2Q9Y608 721 aaKnown RBP2.31□□□□□ -2.04
HPS3-205ENST00000478525 IGLV4-3A0A075B6K6 122 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 XRCC3O43542 346 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 OR10H2O60403 315 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 CEACAM4O75871 244 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 HSPA8P11142 646 aaKnown RBP2.3□□□□□ -2.04
HPS3-205ENST00000478525 CDH2P19022 906 aaPredicted RBP2.3□□□□□ -2.04
HPS3-205ENST00000478525 CCR9P51686 369 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 CASP6P55212 293 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 CDH18Q13634 790 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 ODF4Q2M2E3 257 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 MS4A18Q3C1V0 323 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 UGT3A1Q6NUS8 523 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 LCLAT1Q6UWP7 414 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 LEKR1Q6ZMV7 388 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 NOL8Q76FK4 1167 aaKnown RBP2.3□□□□□ -2.04
HPS3-205ENST00000478525 CHMP1BQ7LBR1 199 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 HAUS6Q7Z4H7 955 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 ZC3H3Q8IXZ2 948 aaKnown RBP2.3□□□□□ -2.04
HPS3-205ENST00000478525 CCDC107Q8WV48 283 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 CALML4Q96GE6 196 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 HOXD1Q9GZZ0 328 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 WNT5BQ9H1J7 359 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 PREBQ9HCU5 417 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 CHMP1AQ9HD42 196 aaPredicted RBP2.3□□□□□ -2.04
HPS3-205ENST00000478525 IKZF3Q9UKT9 509 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 PLCL2Q9UPR0 1127 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 PCDH11YQ9BZA8 1340 aa2.3□□□□□ -2.04
HPS3-205ENST00000478525 C2orf81A6NN90 581 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 FAM220BPB1ANY3 271 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 H0YAE9 185 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 CREG1O75629 220 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 FDPSP14324 419 aaKnown RBP2.29□□□□□ -2.04
HPS3-205ENST00000478525 MGMTP16455 207 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 TNFAIP3P21580 790 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 ZNF415Q09FC8 603 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 BIRC3Q13489 604 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 KRT33BQ14525 404 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 FAM189A2Q15884 450 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 SARM1Q6SZW1 724 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 TMPRSS11FQ6ZWK6 438 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 ZER1Q7Z7L7 766 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 PAPD5Q8NDF8 572 aaKnown RBP2.29□□□□□ -2.04
HPS3-205ENST00000478525 ATF6BQ99941 703 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 YTHDF1Q9BYJ9 559 aaKnown RBP2.29□□□□□ -2.04
HPS3-205ENST00000478525 GRIP1Q9Y3R0 1128 aa2.29□□□□□ -2.04
HPS3-205ENST00000478525 TDRD6O60522 2096 aaKnown RBP2.29□□□□□ -2.04
HPS3-205ENST00000478525 A0A1W2PQ72 361 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 TRIM49BA6NDI0 452 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 IFRD1O00458 451 aaPredicted RBP2.28□□□□□ -2.04
HPS3-205ENST00000478525 HAT1O14929 419 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 LY6G6DO95868 133 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 RPL35AP18077 110 aaKnown RBP2.28□□□□□ -2.04
HPS3-205ENST00000478525 GABRB1P18505 474 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 MNDAP41218 407 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 KHKP50053 298 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 LMOD3Q0VAK6 560 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 TAB1Q15750 504 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 SPECC1Q5M775 1068 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 RSBN1Q5VWQ0 802 aaPredicted RBP2.28□□□□□ -2.04
HPS3-205ENST00000478525 REG3GQ6UW15 175 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 CPLX4Q7Z7G2 160 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 MCEMP1Q8IX19 187 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 MRAPQ8TCY5 172 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 CEP295NLQ96MC4 621 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 MGME1Q9BQP7 344 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 FAM49AQ9H0Q0 323 aaPredicted RBP2.28□□□□□ -2.04
HPS3-205ENST00000478525 SERINC1Q9NRX5 453 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.28□□□□□ -2.04
HPS3-205ENST00000478525 CRYL1Q9Y2S2 319 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 SESN1Q9Y6P5 492 aa2.28□□□□□ -2.04
HPS3-205ENST00000478525 GON4LQ3T8J9 2241 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 TRIOBPQ9H2D6 2365 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 H0Y9J4 135 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 K7EQD1 137 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 FPGTO14772 594 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 THY1P04216 161 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 MMP9P14780 707 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 SOX3P41225 446 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 ZNF177Q13360 481 aaPredicted RBP2.27□□□□□ -2.05
HPS3-205ENST00000478525 EXT1Q16394 746 aa2.27□□□□□ -2.05
HPS3-205ENST00000478525 TSTQ16762 297 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms