RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 BDKRB1P46663 353 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 GNG11P61952 73 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 ARHGAP19Q14CB8 494 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 DEFB110Q30KQ9 67 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 FCRL6Q6DN72 434 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 TCTN3Q6NUS6 607 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.52■■□□□ 1.2
C9orf3-215ENST00000478473 OR2A1Q8NGT9 310 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 GIMAP7Q8NHV1 300 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 N4BP2L2Q92802 583 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-215ENST00000478473 EBNA1BP2Q99848 306 aaKnown RBP22.52■■□□□ 1.2
C9orf3-215ENST00000478473 C20orf96Q9NUD7 363 aaPredicted RBP22.52■■□□□ 1.2
C9orf3-215ENST00000478473 RUVBL2Q9Y230 463 aaKnown RBP22.52■■□□□ 1.2
C9orf3-215ENST00000478473 MAN2B2Q9Y2E5 1009 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 DHRS7Q9Y394 339 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 FER1L5A0AVI2 2057 aa22.52■■□□□ 1.2
C9orf3-215ENST00000478473 CTAGE9A4FU28 777 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 E5RI56 91 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 SMAPO00193 183 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 EIF3FO00303 357 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 SLC28A2O43868 658 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 RFPL1O75677 317 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 CTSBP07858 339 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 AGXTP21549 392 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 CBLBQ13191 982 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 CRYMQ14894 314 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 SF1Q15637 639 aaKnown RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 KLHL38Q2WGJ6 581 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 PTCHD3Q3KNS1 767 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 TTLL9Q3SXZ7 439 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 ZC3H12BQ5HYM0 836 aaKnown RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 CNSTQ6PJW8 725 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 FIGLAQ6QHK4 219 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 ATG14Q6ZNE5 492 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 MCATQ8IVS2 390 aaKnown RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 CNTN4Q8IWV2 1026 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 FAM20CQ8IXL6 584 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 OR9A1PQ8NGU1 263 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 SLC30A3Q99726 388 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 NAPGQ99747 312 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 FAM167BQ9BTA0 163 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 RNF14Q9UBS8 474 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 ASIC3Q9UHC3 531 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 CIDEBQ9UHD4 219 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 HEMK1Q9Y5R4 338 aaPredicted RBP22.51■■□□□ 1.19
C9orf3-215ENST00000478473 SAR1BQ9Y6B6 198 aa22.51■■□□□ 1.19
C9orf3-215ENST00000478473 ARHGEF33A8MVX0 844 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 GFYI3L273 518 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 KLF7O75840 302 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 CD63P08962 238 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 MPC1LP0DKB6 136 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 CBSLP0DN79 551 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 ENO3P13929 434 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 CBSP35520 551 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 HSD17B2P37059 387 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 GRIA3P42263 894 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 MORF4L2Q15014 288 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 HSP90AA5PQ58FG0 334 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 YOD1Q5VVQ6 348 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 CYHR1Q6ZMK1 362 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 GALNT7Q86SF2 657 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 C2orf73Q8N5S3 287 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 C2CD4AQ8NCU7 369 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 OR2L3Q8NG85 312 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 SKA2Q8WVK7 121 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 SLC7A5P2Q9GIP4 190 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 MLXIPLQ9NP71 852 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 FBXO6Q9NRD1 293 aaPredicted RBP22.5■■□□□ 1.19
C9orf3-215ENST00000478473 FAM114A2Q9NRY5 505 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 ANAPC2Q9UJX6 822 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 PYCARDQ9ULZ3 195 aa22.5■■□□□ 1.19
C9orf3-215ENST00000478473 C9J4A7 227 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 MKRN2OSH3BPM6 223 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 CCDC188H7C350 402 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 SRPX2O60687 465 aaPredicted RBP22.49■■□□□ 1.19
C9orf3-215ENST00000478473 DCDP81605 110 aaKnown RBP22.49■■□□□ 1.19
C9orf3-215ENST00000478473 DHX9Q08211 1270 aaKnown RBP22.49■■□□□ 1.19
C9orf3-215ENST00000478473 NAA25Q14CX7 972 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 MSS51Q4VC12 460 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 TCTE1Q5JU00 501 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 SPANXN3Q5MJ09 141 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 KCNMB4Q86W47 210 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 ASB11Q8WXH4 323 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 INPP5DQ92835 1189 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 FAM136AQ96C01 138 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 AARSD1Q9BTE6 412 aaKnown RBP22.49■■□□□ 1.19
C9orf3-215ENST00000478473 PLAC1Q9HBJ0 212 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.49■■□□□ 1.19
C9orf3-215ENST00000478473 TLK1Q9UKI8 766 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 SNX7Q9UNH6 387 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 KLHL20Q9Y2M5 609 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 TENM4Q6N022 2769 aa22.49■■□□□ 1.19
C9orf3-215ENST00000478473 FITM1A5D6W6 292 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 FANCGO15287 622 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 HAUS5O94927 633 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 CATP04040 527 aaKnown RBP22.48■■□□□ 1.19
C9orf3-215ENST00000478473 ARSFP54793 590 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 NFKB2Q00653 900 aa22.48■■□□□ 1.19
C9orf3-215ENST00000478473 LACTB2Q53H82 288 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms