RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 BRIX1Q8TDN6 353 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SKA2Q8WVK7 121 aaPredicted RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ITLN2Q8WWU7 325 aaPredicted RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 NR4A3Q92570 626 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 MIEF2Q96C03 454 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CCDC42Q96M95 316 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 IL17FQ96PD4 163 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SPSB2Q99619 263 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SLX1AQ9BQ83 275 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SELENOSQ9BQE4 189 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 GORASP1Q9BQQ3 440 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 MESP1Q9BRJ9 268 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CHST11Q9NPF2 352 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PIH1D1Q9NWS0 290 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 OR6C2Q9NZP2 312 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 TSR3Q9UJK0 312 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 NXT1Q9UKK6 140 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC39A10Q9ULF5 831 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PRSS21Q9Y6M0 314 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 FAM169AQ9Y6X4 670 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PDZD2O15018 2839 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PCNX1Q96RV3 2341 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SCN3AQ9NY46 2000 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 HEATR5BQ9P2D3 2071 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TRAV17A0A0B4J275 112 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 SYCE3A1L190 88 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 OR51F1A6NGY5 319 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 FAM227AF5H4B4 570 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 APOC4-APOC2K7ER74 178 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 QSOX1O00391 747 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 FFAR3O14843 346 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 PCDH17O14917 1159 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 GPR42O15529 346 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 WFS1O76024 890 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 USP1O94782 785 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 AP2A2O94973 939 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 RASAL1O95294 804 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 AP2A1O95782 977 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 HPP00738 406 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 APOC2P02655 101 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ALBP02768 609 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 RPN2P04844 631 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 GSTM1P09488 218 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 OR56A5P0C7T3 313 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TPBGLP0DKB5 382 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 FBLP22087 321 aaKnown RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 MSNP26038 577 aaKnown RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 PKLRP30613 574 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ADRA1AP35348 466 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 MARCKSL1P49006 195 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 CARSP49589 748 aaKnown RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 RAB28P51157 221 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TDGF1P3P51864 188 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 EIF3EP60228 445 aaKnown RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 PMP22Q01453 160 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 GSTM4Q03013 218 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 HSPA14Q0VDF9 509 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TSTA3Q13630 321 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TCTE1Q5JU00 501 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 MFSD4BQ5TF39 518 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 MTFR2Q6P444 385 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 IGFL2Q6UWQ7 119 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 RANBP10Q6VN20 620 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 BNC2Q6ZN30 1099 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 COX15Q7KZN9 410 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 PIANPQ8IYJ0 282 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 RCOR2Q8IZ40 523 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF808Q8N4W9 903 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 OR8K1Q8NGG5 319 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 FLVCR1-AS1Q8TAF5 88 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 GSDMBQ8TAX9 411 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ACTL9Q8TC94 416 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 STT3BQ8TCJ2 826 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 CHTF18Q8WVB6 975 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 RELTQ969Z4 430 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 NACC2Q96BF6 587 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 SLC22A18Q96BI1 424 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 MAGED4Q96JG8 741 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 CABS1Q96KC9 395 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TAAR6Q96RI8 345 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 CHP1Q99653 195 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 TSSK1BQ9BXA7 367 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 NHEJ1Q9H9Q4 299 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF304Q9HCX3 659 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 NLE1Q9NVX2 485 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 STOX2Q9P2F5 926 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ZNF282Q9UDV7 671 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 ZC3H7BQ9UGR2 993 aaKnown RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 C3orf18Q9UK00 162 aa6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 MRPS2Q9Y399 296 aaKnown RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 KLF2Q9Y5W3 355 aaPredicted RBP6.39□□□□□ -1.39
RTFDC1-206ENST00000477485 NCOA6Q14686 2063 aaPredicted RBP6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 IGLV3-16A0A075B6K0 115 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 TRBV5-4A0A0C4DH59 114 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 A0A0J9YVX5 310 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 HYKKA2RU49 373 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 AGAP14A8MT82 685 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 F8W8V4 182 aa6.38□□□□□ -1.39
RTFDC1-206ENST00000477485 S1PR4O95977 384 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms