RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 LRRC1Q9BTT6 524 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 ITPAQ9BY32 194 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 MAGIXQ9H6Y5 334 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 FAM118AQ9NWS6 357 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 HCFC1R1Q9NWW0 138 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 RNF186Q9NXI6 227 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 MORF4L1Q9UBU8 362 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 ADD3Q9UEY8 706 aaKnown RBP3.84□□□□□ -1.79
UBR3-209ENST00000477461 MTMR6Q9Y217 621 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 KCNK7Q9Y2U2 307 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 LOXL2Q9Y4K0 774 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 LYVE1Q9Y5Y7 322 aa3.84□□□□□ -1.79
UBR3-209ENST00000477461 PLXNA1Q9UIW2 1896 aa3.84□□□□□ -1.8
UBR3-209ENST00000477461 MYH7BA7E2Y1 1941 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 TCHHQ07283 1943 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 FAM237BA0A1B0GVD1 139 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 SLC15A5A6NIM6 579 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 MEIS2O14770 477 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 NDUFS3O75489 264 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 RNASEH2AO75792 299 aaKnown RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 MLYCDO95822 493 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 ACADMP11310 421 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 NR1D1P20393 614 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 UBA1P22314 1058 aaKnown RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 U2AF2P26368 475 aaKnown RBP eCLIP3.83□□□□□ -1.84e-14■■■■■ 32.6
UBR3-209ENST00000477461 HOXD10P28358 340 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 CCND2P30279 289 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 HSD17B4P51659 736 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 F2RL1P55085 397 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 RPS6P62753 249 aaKnown RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 CSNK2A1P68400 391 aaPredicted RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 PMP22Q01453 160 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 SP3Q02447 781 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 STK38Q15208 465 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 DECR1Q16698 335 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 LETM2Q2VYF4 491 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 CDONQ4KMG0 1287 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 RILPL1Q5EBL4 403 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 SIRPB2Q5JXA9 342 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 HYIQ5T013 277 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 ARHGAP17Q68EM7 881 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 ATL3Q6DD88 541 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 JADE1Q6IE81 842 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 TRNP1Q6NT89 227 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 DUS1LQ6P1R4 473 aaKnown RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 RAD9BQ6WBX8 426 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 GLDNQ6ZMI3 551 aaPredicted RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 C4orf50Q6ZRC1 276 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 SEPT14Q6ZU15 432 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 GPR142Q7Z601 462 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 TSPAN33Q86UF1 283 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 CSNK2A3Q8NEV1 391 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 KCNG4Q8TDN1 519 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 TBCKQ8TEA7 893 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 USP6NLQ92738 828 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 ERO1AQ96HE7 468 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 PORCNQ9H237 461 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 POLR1BQ9H9Y6 1135 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 CNOT8Q9UFF9 292 aaKnown RBP3.83□□□□□ -1.8
UBR3-209ENST00000477461 CFAP45Q9UL16 551 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 RIPK3Q9Y572 518 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 MAU2Q9Y6X3 613 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 THSD7BQ9C0I4 1608 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 DOCK3Q8IZD9 2030 aa3.83□□□□□ -1.8
UBR3-209ENST00000477461 MCM3APO60318 1980 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 KIAA1217Q5T5P2 1943 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 GOLGA6L4A6NEF3 574 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 ASB14A6NK59 587 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 A8MZ25 164 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 VCYO14598 125 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 EXTL3O43909 919 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 WDR1O75083 606 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 STAM2O75886 525 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 NKX2-2O95096 273 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 BAG4O95429 457 aaKnown RBP3.82□□□□□ -1.8
UBR3-209ENST00000477461 PGK2P07205 417 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 TUBBP07437 444 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 GCFC2P16383 781 aaKnown RBP3.82□□□□□ -1.8
UBR3-209ENST00000477461 NFKBIAP25963 317 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 PSMC4P43686 418 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 GEMIN4P57678 1058 aaKnown RBP3.82□□□□□ -1.8
UBR3-209ENST00000477461 TUBB4BP68371 445 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 UBXN2AP68543 259 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 MRPS34P82930 218 aaKnown RBP3.82□□□□□ -1.8
UBR3-209ENST00000477461 CNTN2Q02246 1040 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 CEBPZQ03701 1054 aaKnown RBP3.82□□□□□ -1.8
UBR3-209ENST00000477461 ORC2Q13416 577 aaPredicted RBP3.82□□□□□ -1.8
UBR3-209ENST00000477461 STXBP2Q15833 593 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 PCGF3Q3KNV8 242 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 LCN10Q6JVE6 187 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 TTI2Q6NXR4 508 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 FAM171BQ6P995 826 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 BRAT1Q6PJG6 821 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 NRROSQ86YC3 692 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 ANKRD52Q8NB46 1076 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 KLHDC9Q8NEP7 349 aa3.82□□□□□ -1.8
UBR3-209ENST00000477461 ANKRD9Q96BM1 317 aaPredicted RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms