RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TIFAQ96CG3 184 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 ZHX1-C8orf76Q96EF9 292 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 CASD1Q96PB1 797 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MAGEE1Q9HCI5 957 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 PCDHGA11Q9Y5H2 935 aa10.76□□□□□ -0.69
COL27A1-204ENST00000477421 MMP20O60882 483 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ADH1CP00326 375 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 FABP3P05413 133 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 BCKDHAP12694 445 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 BUD31P41223 144 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 GANABQ14697 944 aaKnown RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 AGTRAPQ6RW13 159 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 KIAA2013Q8IYS2 634 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 HS3ST5Q8IZT8 346 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 SMYD1Q8NB12 490 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 GLB1L3Q8NCI6 653 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 C11orf65Q8NCR3 313 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PXYLP1Q8TE99 480 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 STARD8Q92502 1023 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ATOH8Q96SQ7 321 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CCM2LQ9NUG4 571 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 DNAJB9Q9UBS3 223 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PLAGL1Q9UM63 463 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 SQORQ9Y6N5 450 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 NPIPB15A6NHN6 443 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 C1QTNF3-AMACRE9PGA6 284 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 J3QRK9 145 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 QSOX1O00391 747 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CREG1O75629 220 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 DEFB103AP81534 67 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ARF5P84085 180 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 SLBPQ14493 270 aaKnown RBP eCLIP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 RFLNAQ6ZTI6 216 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PHC3Q8NDX5 983 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 FBXL8Q96CD0 374 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 DPH2Q9BQC3 489 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 SDR39U1Q9NRG7 319 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 DPP7Q9UHL4 492 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TMEM98Q9Y2Y6 226 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF451Q9Y4E5 1061 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 WNT9AO14904 365 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TSPAN6O43657 245 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CDH1P12830 882 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TNNI3P19429 210 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 MAPK9P45984 424 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 NUDT6P53370 316 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TRAF3Q13114 568 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 MBTPS1Q14703 1052 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 GPAT3Q53EU6 434 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 NCEH1Q6PIU2 408 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 EIF3MQ7L2H7 374 aaKnown RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 SLCO6A1Q86UG4 719 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 EGFL6Q8IUX8 553 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TCAIMQ8N3R3 496 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 RNF175Q8N4F7 328 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF557Q8N988 423 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TTC29Q8NA56 475 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 FLCNQ8NFG4 579 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 OR10G6Q8NH81 332 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 FAM110BQ8TC76 370 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 L3HYPDHQ96EM0 354 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TOR3AQ9H497 397 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ETAA1Q9NY74 926 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 AP3M1Q9Y2T2 418 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 DRGXA6NNA5 263 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TNFRSF11BO00300 401 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TRIM24O15164 1050 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 SLC28A2O43868 658 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 XPNPEP2O43895 674 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PCDH7O60245 1069 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CAPN15O75808 1086 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PDYNP01213 254 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ENO2P09104 434 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CLTBP09497 229 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ACADMP11310 421 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 GPX3P22352 226 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 DPP6P42658 865 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 ZXDBP98169 803 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 LRP8Q14114 963 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 C2orf27AQ580R0 203 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 OR52E8Q6IFG1 317 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CNKSR3Q6P9H4 555 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 KIAA1324Q6UXG2 1013 aaKnown RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 TERB1Q8NA31 727 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PEX13Q92968 403 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 CCDC177Q9NQR7 707 aaPredicted RBP10.75□□□□□ -0.69
COL27A1-204ENST00000477421 LYVE1Q9Y5Y7 322 aa10.75□□□□□ -0.69
COL27A1-204ENST00000477421 PLK4O00444 970 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 OR1F1O43749 312 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PRAMEF12O95522 483 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ASLP04424 464 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ARSFP54793 590 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 DGUOKQ16854 277 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 MFSD4BQ5TF39 518 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PAGE2Q7Z2X7 111 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 THOC6Q86W42 341 aaKnown RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 OR14C36Q8NHC7 312 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 GPR78Q96P69 363 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 EPS8L2Q9H6S3 715 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms