RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 OTOAQ7RTW8 1153 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 AMZ2Q86W34 360 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 NLGN4XQ8N0W4 816 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 ZBTB2Q8N680 514 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 AGBL5Q8NDL9 886 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 NLGN4YQ8NFZ3 816 aaPredicted RBP11.24□□□□□ -0.61
LSM2-212ENST00000477182 CD200R1Q8TD46 325 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 LINC00615Q96LM1 132 aaPredicted RBP11.24□□□□□ -0.61
LSM2-212ENST00000477182 TEFMQ96QE5 360 aaKnown RBP11.24□□□□□ -0.61
LSM2-212ENST00000477182 TIMM29Q9BSF4 260 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 TMEM168Q9H0V1 697 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 SNX15Q9NRS6 342 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 SPATS2LQ9NUQ6 558 aaKnown RBP11.24□□□□□ -0.61
LSM2-212ENST00000477182 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
LSM2-212ENST00000477182 DNAJC16Q9Y2G8 782 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 DHRS7Q9Y394 339 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 KCNMB2Q9Y691 235 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 DGKBQ9Y6T7 804 aa11.24□□□□□ -0.61
LSM2-212ENST00000477182 MGAT4DA6NG13 374 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 GOLGA8RI6L899 631 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 RFPL1O75677 317 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 GSTM1P09488 218 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 CD9P21926 228 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 GRNP28799 593 aaKnown RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 CRABP2P29373 138 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 CSTF2P33240 577 aaKnown RBP eCLIP11.23□□□□□ -0.61
LSM2-212ENST00000477182 MAGEA12P43365 314 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 GSTM4Q03013 218 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 ABHD18Q0P651 414 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 NFE2L1Q14494 772 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 ZKSCAN8Q15776 578 aaPredicted RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 ZNF658BQ4V348 819 aaPredicted RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 SYTL3Q4VX76 610 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 ACSBG2Q5FVE4 666 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 UGT3A1Q6NUS8 523 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 PAQR3Q6TCH7 311 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 TMEM207Q6UWW9 146 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 TIFABQ6ZNK6 161 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 TIPARPQ7Z3E1 657 aaKnown RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 CPNE9Q8IYJ1 553 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 CFAP206Q8IYR0 622 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 LILRA3Q8N6C8 439 aaPredicted RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 RCBTB1Q8NDN9 531 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 OR2L2Q8NH16 312 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 CCL4L1Q8NHW4 92 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 HM13Q8TCT9 377 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 STARD8Q92502 1023 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 INPP5DQ92835 1189 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 ISL2Q96A47 359 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 PGM2Q96G03 612 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 TRIT1Q9H3H1 467 aaKnown RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 ACBD3Q9H3P7 528 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 RDH14Q9HBH5 336 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 TMBIM4Q9HC24 238 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 LATS2Q9NRM7 1088 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 KLC4Q9NSK0 619 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 SLC39A1Q9NY26 324 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 PILRAQ9UKJ1 303 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 KCNK6Q9Y257 313 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 PCDHB3Q9Y5E6 796 aa11.23□□□□□ -0.61
LSM2-212ENST00000477182 DNMT3AQ9Y6K1 912 aaPredicted RBP11.23□□□□□ -0.61
LSM2-212ENST00000477182 A0A096LPK6 155 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 IGHV5-10-1A0A0J9YXX1 117 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 C17orf113A0A1B0GUU1 675 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 SLC5A10A0PJK1 596 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 B4E171 279 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 KPNA5O15131 536 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 WISP3O95389 354 aaPredicted RBP11.22□□□□□ -0.61
LSM2-212ENST00000477182 C2P06681 752 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 APOA4P06727 396 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 SLC35E2BP0CK96 405 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 VCLP18206 1134 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 AK4P27144 223 aaPredicted RBP11.22□□□□□ -0.61
LSM2-212ENST00000477182 TSPAN7P41732 249 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 SKIV2L2P42285 1042 aaKnown RBP11.22□□□□□ -0.61
LSM2-212ENST00000477182 PREPP48147 710 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 IRF9Q00978 393 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 CTBSQ01459 385 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 HSPA14Q0VDF9 509 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 TTLL9Q3SXZ7 439 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 PLEKHS1Q5SXH7 462 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 C16orf46Q6P387 395 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 TRABD2AQ86V40 505 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 VRK3Q8IV63 474 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 CNPY4Q8N129 248 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 FAM46DQ8NEK8 389 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 ASZ1Q8WWH4 475 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 PMEPA1Q969W9 287 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 ARL8AQ96BM9 186 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 CCDC74BQ96LY2 380 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 SH3GL2Q99962 352 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 SLC29A3Q9BZD2 475 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 VPS11Q9H270 941 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 OSGEPL1Q9H4B0 414 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 COG4Q9H9E3 785 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 POPDC3Q9HBV1 291 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 PCMTD2Q9NV79 361 aa11.22□□□□□ -0.61
LSM2-212ENST00000477182 TRNAU1APQ9NX07 287 aaKnown RBP11.22□□□□□ -0.61
LSM2-212ENST00000477182 KLHL42Q9P2K6 505 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms