RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 AP2A1O95782 977 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 WDPCPO95876 746 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SERPINA7P05543 415 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 COX6A1P12074 109 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 FDXRP22570 491 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 MC4RP32245 332 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 GRIA3P42263 894 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SMSP52788 366 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 GEMP55040 296 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CASP6P55212 293 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 RBPJQ06330 500 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 TYRO3Q06418 890 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 GRM7Q14831 915 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 C3AR1Q16581 482 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 TCTE1Q5JU00 501 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CLEC17AQ6ZS10 378 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 NDUFAF7Q7L592 441 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SERPINA9Q86WD7 417 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 PRSS58Q8IYP2 241 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SIRT6Q8N6T7 355 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 LINC01555Q8NAE3 123 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 ACBD4Q8NC06 268 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SLC35G2Q8TBE7 412 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 STT3BQ8TCJ2 826 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 QKIQ96PU8 341 aaKnown RBP eCLIP10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SPOCK3Q9BQ16 436 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 C19orf43Q9BQ61 176 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 BPIFA3Q9BQP9 254 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 NAT10Q9H0A0 1025 aaKnown RBP10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.86□□□□□ -0.67
BRCA1-213ENST00000476777 GBA3Q9H227 469 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 MCCC2Q9HCC0 563 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 IL1RAPL1Q9NZN1 696 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 TINAGQ9UJW2 476 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 C3orf18Q9UK00 162 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 TRHDEQ9UKU6 1024 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CAPN11Q9UMQ6 739 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 MRPS2Q9Y399 296 aaKnown RBP10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CPAMD8Q8IZJ3 1885 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 NSG1A0A0A6YYJ2 146 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 ANXA9O76027 345 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 AP2A2O94973 939 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 MED26O95402 600 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 ZGLP1P0C6A0 271 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 PRSS56P0CW18 603 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 ESRRAP11474 423 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-213ENST00000476777 PKLRP30613 574 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 ARHGAP25P42331 645 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 NSG1P42857 185 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 TLE4Q04727 773 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 TFDP2Q14188 446 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 BRD3Q15059 726 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 ODF2Q5BJF6 829 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 KAZNQ674X7 775 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 TAS2R42Q7RTR8 314 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 CEP97Q8IW35 865 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 PIANPQ8IYJ0 282 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 CHTF18Q8WVB6 975 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 P3H4Q92791 437 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 MIEF2Q96C03 454 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 MENTQ9BUN1 341 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 RNF32Q9H0A6 362 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 LUC7LQ9NQ29 371 aaKnown RBP10.85□□□□□ -0.67
BRCA1-213ENST00000476777 DDX56Q9NY93 547 aaKnown RBP10.85□□□□□ -0.67
BRCA1-213ENST00000476777 PRSS21Q9Y6M0 314 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 NSD1Q96L73 2696 aaPredicted RBP10.85□□□□□ -0.67
BRCA1-213ENST00000476777 DNAJC13O75165 2243 aa10.85□□□□□ -0.67
BRCA1-213ENST00000476777 IGLV3-12A0A075B6K2 115 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 A0A1W2PQ72 361 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 SLC5A10A0PJK1 596 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 SMTNL1A8MU46 457 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 HACD1B0YJ81 288 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 KDM1AO60341 852 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 BMP10O95393 424 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 SERPINC1P01008 464 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 CELA2AP08217 269 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 TMEM253P0C7T8 217 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 TNNT1P13805 278 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 CD1EP15812 388 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 HOXB4P17483 251 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 RAB28P51157 221 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 OCA2Q04671 838 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 SLC18A3Q16572 532 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 DBN1Q16643 649 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 FAM214AQ32MH5 1076 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 ZC3H12BQ5HYM0 836 aaKnown RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 FAAH2Q6GMR7 532 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 DENND5AQ6IQ26 1287 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 HIBCHQ6NVY1 386 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 FIGLAQ6QHK4 219 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 NAPRTQ6XQN6 538 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 RIPOR1Q6ZS17 1223 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 ARHGEF18Q6ZSZ5 1173 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 LMNTD1Q8N9Z9 388 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 TTC29Q8NA56 475 aaPredicted RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 ELMO1Q92556 727 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 HAUS1Q96CS2 278 aa10.84□□□□□ -0.67
BRCA1-213ENST00000476777 DNAJC1Q96KC8 554 aaKnown RBP10.84□□□□□ -0.67
BRCA1-213ENST00000476777 SELENOSQ9BQE4 189 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms