RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 DEFB110Q30KQ9 67 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 FAM153CQ494X1 144 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 TEX35Q5T0J7 233 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 TMEM164Q5U3C3 297 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 KIAA1614Q5VZ46 1190 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 PWWP2BQ6NUJ5 590 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 TTC23LQ6PF05 361 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SUSD1Q6UWL2 747 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CEACAM20Q6UY09 585 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CDHR3Q6ZTQ4 885 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 KMT5CQ86Y97 462 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 LRRC56Q8IYG6 542 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 MAGEC3Q8TD91 643 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 ZNF480Q8WV37 535 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 ANKRD7Q92527 254 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CDKL2Q92772 493 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 MRRFQ96E11 262 aaKnown RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CPNE1Q99829 537 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 UNKQ9C0B0 810 aaKnown RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 B3GNT4Q9C0J1 378 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 FGF21Q9NSA1 209 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 WDR70Q9NW82 654 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SOHLH2Q9NX45 425 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 NSMCE4AQ9NXX6 385 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SPATA7Q9P0W8 599 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 PILRAQ9UKJ1 303 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 PDE10AQ9Y233 779 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 PCM1Q15154 2024 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 HMX2A2RU54 273 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 CDC7O00311 574 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 PHGDHO43175 533 aaKnown RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 EFSO43281 561 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 ZBTB14O43829 449 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 KDM1AO60341 852 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SPAG6O75602 509 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 STK17BO94768 372 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 KIAA0754O94854 1291 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 DLGAP3O95886 979 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 LIPCP11150 499 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 WT1P19544 449 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 MAGP20916 626 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 IMPA1P29218 277 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 GRIA3P42263 894 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 ARL4DP49703 201 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 RGS4P49798 205 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 PNLIPRP1P54315 467 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 IL2P60568 153 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 TUBB4BP68371 445 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 TSTA3Q13630 321 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 IL11RAQ14626 422 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SF1Q15637 639 aaKnown RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 FCRL6Q6DN72 434 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 VASH2Q86V25 355 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 PPP1R3BQ86XI6 285 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 IFT20Q8IY31 132 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 CARFQ8N187 725 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 MYO1HQ8N1T3 1032 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SPATA6LQ8N4H0 392 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 C19orf47Q8N9M1 422 aaKnown RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SLC38A9Q8NBW4 561 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 FBXO15Q8NCQ5 510 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 OR2A1Q8NGT9 310 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 OR1L3Q8NH93 324 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 UHMK1Q8TAS1 419 aaKnown RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 HMGCLL1Q8TB92 370 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 NKD1Q969G9 470 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 GPR22Q99680 433 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 MIPEPQ99797 713 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 ACAT2Q9BWD1 397 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 RAB11FIP5Q9BXF6 653 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SLC12A9Q9BXP2 914 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 ASPSCR1Q9BZE9 553 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 FAM129AQ9BZQ8 928 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SYNPO2LQ9H987 977 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 PDE7BQ9NP56 450 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 ABCF3Q9NUQ8 709 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 LNPEPQ9UIQ6 1025 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 RARRES3Q9UL19 164 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 SSUH2Q9Y2M2 353 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 TMEM184BQ9Y519 407 aaPredicted RBP9.34□□□□□ -0.91
HDAC3-208ENST00000476739 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
HDAC3-208ENST00000476739 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TMEM150CB9EJG8 249 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 E7ENX8 843 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 STMND1H3BQB6 276 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 RRP8O43159 456 aaKnown RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 RAD1O60671 282 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 KRT37O76014 449 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 NTRK1P04629 796 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 C8GP07360 202 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 CD82P27701 267 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 MAP4P27816 1152 aaKnown RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 OAS2P29728 719 aaKnown RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 POU4F1Q01851 419 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 ACY1Q03154 408 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 TAP2Q03519 686 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 BMPR2Q13873 1038 aa9.33□□□□□ -0.92
HDAC3-208ENST00000476739 USP10Q14694 798 aaKnown RBP9.33□□□□□ -0.92
HDAC3-208ENST00000476739 ZKSCAN8Q15776 578 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms