RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 LINC00696Q6ZRV3 163 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 NUP93Q8N1F7 819 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 GRK7Q8WTQ7 553 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 PROX1Q92786 737 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 THOC3Q96J01 351 aaKnown RBP5.5□□□□□ -1.53
VPS50-212ENST00000476413 FAM71F1Q96KD3 344 aaPredicted RBP5.5□□□□□ -1.53
VPS50-212ENST00000476413 ZNF583Q96ND8 569 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 PARK7Q99497 189 aaKnown RBP5.5□□□□□ -1.53
VPS50-212ENST00000476413 FUT8Q9BYC5 575 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 KRTAP9-8Q9BYQ0 159 aa5.5□□□□□ -1.53
VPS50-212ENST00000476413 CAPN9O14815 690 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 ST8SIA3O43173 380 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 XPNPEP2O43895 674 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 SPP1P10451 314 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 NR2C2P49116 596 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 LGALS3BPQ08380 585 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 DCAF10Q5QP82 559 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 PDSS1Q5T2R2 415 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 CYP4A22Q5TCH4 519 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 NRARPQ7Z6K4 114 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 ZNF554Q86TJ5 538 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 APCDD1Q8J025 514 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 ZNF843Q8N446 348 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 MAPKAPK5-AS1Q8N8E1 139 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 RASGEF1AQ8N9B8 481 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 UXS1Q8NBZ7 420 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 SLC24A4Q8NFF2 622 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 DBF4BQ8NFT6 615 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 OR1J1Q8NGS3 322 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 THOC1Q96FV9 657 aaKnown RBP5.49□□□□□ -1.53
VPS50-212ENST00000476413 DOCK7Q96N67 2140 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 DNAI2Q9GZS0 605 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 LAT2Q9GZY6 243 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 MINDY3Q9H8M7 445 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 ZBTB20Q9HC78 741 aaPredicted RBP5.49□□□□□ -1.53
VPS50-212ENST00000476413 ZDHHC2Q9UIJ5 367 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 SLC7A7Q9UM01 511 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 JRKLQ9Y4A0 524 aa5.49□□□□□ -1.53
VPS50-212ENST00000476413 TRAV24A0A0B4J272 114 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 OOEPA6NGQ2 149 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 C16orf97H3BN30 126 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 PRAF2O60831 178 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 GOSR1O95249 250 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 FGF3P11487 239 aaPredicted RBP5.48□□□□□ -1.53
VPS50-212ENST00000476413 FGF5P12034 268 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 EEF2P13639 858 aaKnown RBP5.48□□□□□ -1.53
VPS50-212ENST00000476413 IRF2P14316 349 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 CA4P22748 312 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 HSD17B3P37058 310 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 DCTP40126 519 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 TAF10Q12962 218 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 FHL1Q13642 323 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 LRRC73Q5JTD7 316 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 IYDQ6PHW0 289 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 SPSB3Q6PJ21 355 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 NFE4Q86UQ8 179 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 HOOK3Q86VS8 718 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 POC1AQ8NBT0 407 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 OR10Q1Q8NGQ4 319 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 UBE2Q2Q8WVN8 375 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 RIT1Q92963 219 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 ST6GAL2Q96JF0 529 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 TUFT1Q9NNX1 390 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 SPHK1Q9NYA1 384 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 SEPT10Q9P0V9 454 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 TXNDC16Q9P2K2 825 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 ARMCX3Q9UH62 379 aaPredicted RBP5.48□□□□□ -1.53
VPS50-212ENST00000476413 ACAD8Q9UKU7 415 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 ITGA11Q9UKX5 1188 aa5.48□□□□□ -1.53
VPS50-212ENST00000476413 SMCHD1A6NHR9 2005 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 A0A1W2PN81 502 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 YDJCA8MPS7 323 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 SLC22A2O15244 555 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 PGLSO95336 258 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 TSHBP01222 138 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 SP100P23497 879 aaPredicted RBP5.47□□□□□ -1.53
VPS50-212ENST00000476413 CHRNA7P36544 502 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 NKX2-1P43699 371 aaPredicted RBP5.47□□□□□ -1.53
VPS50-212ENST00000476413 RPL21P46778 160 aaKnown RBP5.47□□□□□ -1.53
VPS50-212ENST00000476413 ALDH3A2P51648 485 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 CDH11P55287 796 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 DMP1Q13316 513 aaPredicted RBP5.47□□□□□ -1.53
VPS50-212ENST00000476413 ODF4Q2M2E3 257 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 CYB5D1Q6P9G0 228 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 C9orf139Q6ZV77 190 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 ANKRD33Q7Z3H0 272 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 KLHL7Q8IXQ5 586 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 SYCP3Q8IZU3 236 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 OR4K1Q8NGD4 311 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 ALG14Q96F25 216 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 TFB2MQ9H5Q4 396 aaKnown RBP5.47□□□□□ -1.53
VPS50-212ENST00000476413 ZNF556Q9HAH1 456 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 SDR39U1Q9NRG7 319 aaPredicted RBP5.47□□□□□ -1.53
VPS50-212ENST00000476413 GSN-AS1Q9NRJ2 163 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 CACNG4Q9UBN1 327 aa5.47□□□□□ -1.53
VPS50-212ENST00000476413 LOC101059948A0A1B0GTJ6 334 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 PPIP5K2O43314 1243 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 PIGNO95427 931 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 RLN1P04808 185 aa5.46□□□□□ -1.54
VPS50-212ENST00000476413 RASGEF1BQ0VAM2 473 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms