RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 SYT11Q9BT88 431 aa13.82□□□□□ -0.2
CSNK2B-207ENST00000475875 HGH1Q9BTY7 390 aa13.82□□□□□ -0.2
CSNK2B-207ENST00000475875 GRPEL1Q9HAV7 217 aa13.82□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF282Q9UDV7 671 aaPredicted RBP13.82□□□□□ -0.2
CSNK2B-207ENST00000475875 NPIPA1Q9UND3 350 aa13.82□□□□□ -0.2
CSNK2B-207ENST00000475875 GTF3C1Q12789 2109 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 IGHV1-45A0A0A0MS14 117 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 GAPDHSO14556 408 aaPredicted RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 SGTAO43765 313 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 CHRM5P08912 532 aaPredicted RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 FERP16591 822 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 YBX1P67809 324 aaKnown RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 PPIDQ08752 370 aaKnown RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZBTB17Q13105 803 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 OLIG2Q13516 323 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 FIGNQ5HY92 759 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 UNC5AQ6ZN44 842 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 CHERPQ8IWX8 916 aaKnown RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 TTC29Q8NA56 475 aaPredicted RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 LRRN4CLQ8ND94 238 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 MYRIPQ8NFW9 859 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF398Q8TD17 642 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 TFGQ92734 400 aaPredicted RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 TRIM11Q96F44 468 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 MRFAP1L1Q96HT8 127 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF830Q96NB3 372 aaPredicted RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF285Q96NJ3 590 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 MESP1Q9BRJ9 268 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF670Q9BS34 389 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 POLDIP3Q9BY77 421 aaKnown RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 COG4Q9H9E3 785 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF358Q9NW07 568 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 PKP3Q9Y446 797 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 HCFC1P51610 2035 aa13.81□□□□□ -0.2
CSNK2B-207ENST00000475875 IGLV3-12A0A075B6K2 115 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 FAM237BA0A1B0GVD1 139 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 FITM1A5D6W6 292 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 TMCO5BA8MYB1 307 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 IDSB3KWA1 339 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 CD48P09326 243 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 MYBL1P10243 752 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 RALBP11234 206 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 GZMAP12544 262 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 OR1D4P47884 311 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 ARSEP51690 589 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 DGKQP52824 942 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 GBE1Q04446 702 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 TRIM14Q14142 442 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 DPYSL3Q14195 570 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 KIR2DS3Q14952 304 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 PRMT9Q6P2P2 845 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 VSTM4Q8IW00 320 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 FAM98AQ8NCA5 519 aaKnown RBP13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 HEXDCQ8WVB3 486 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 DCUN1D1Q96GG9 259 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 FRMD6Q96NE9 622 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 VPS37BQ9H9H4 285 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 SPHK1Q9NYA1 384 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 CAPN11Q9UMQ6 739 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 PLEKHA6Q9Y2H5 1048 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 ASB1Q9Y576 335 aa13.8□□□□□ -0.2
CSNK2B-207ENST00000475875 DDX3XO00571 662 aaKnown RBP eCLIP13.79□□□□□ -0.28e-46■■■□□ 18.2
CSNK2B-207ENST00000475875 EPOP01588 193 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 FTLP02792 175 aaPredicted RBP13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 ITGAMP11215 1152 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 EEF1DP29692 281 aaKnown RBP13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF33BQ06732 778 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 PRKG2Q13237 762 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 C3P1Q6ZMU1 363 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 NEK10Q6ZWH5 1172 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 TMEM178AQ8NBL3 297 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 PHC3Q8NDX5 983 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 HDAC10Q969S8 669 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 SCMH1Q96GD3 660 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 TSPAN10Q9H1Z9 355 aaPredicted RBP13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF304Q9HCX3 659 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNHIT6Q9NWK9 470 aaKnown RBP13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 POLG2Q9UHN1 485 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 MYO6Q9UM54 1294 aa13.79□□□□□ -0.2
CSNK2B-207ENST00000475875 LOC102723996A0A087X1L8 192 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 LOC285095A0A1B0GVY8 99 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 NKX2-6A6NCS4 301 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 FAM90A27PA6NNH2 459 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 GOLGA6L6A8MZA4 724 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 CFAP99D6REC4 459 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 KLK8O60259 260 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 KDM1AO60341 852 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 GSTM1P09488 218 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 EMP2P54851 167 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 ZBED6P86452 979 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 GSTM4Q03013 218 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 SLC10A2Q12908 348 aaPredicted RBP13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 ZNF658BQ4V348 819 aaPredicted RBP13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 GLT6D1Q7Z4J2 308 aa13.78□□□□□ -0.2
CSNK2B-207ENST00000475875 MDS2Q8NDY4 140 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms