RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 IGHV5-10-1A0A0J9YXX1 117 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 A0A1W2PPM1 405 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CLEC18AA5D8T8 446 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC151A5D8V7 595 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 OR6C74A6NCV1 312 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 NPEPPSL1A6NEC2 478 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 OR5K3A6NET4 321 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 BTN3A1O00481 513 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 PRAMEF10O60809 474 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 UBXN7O94888 489 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CPNE6O95741 557 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SLC16A8O95907 504 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 MT-CO3P00414 261 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 C9P02748 559 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TUBBP07437 444 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 INHBAP08476 426 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SNRPAP09012 282 aaKnown RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SBK3P0C264 359 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CCDC166P0CW27 439 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CD1DP15813 335 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 H2AFXP16104 143 aaPredicted RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 STMN1P16949 149 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 NDUFS1P28331 727 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 PKLRP30613 574 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SERPINB9P50453 376 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 GPLD1P80108 840 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 E2F1Q01094 437 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TLE1Q04724 770 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF844Q08AG5 666 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 VAC14Q08AM6 782 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 FASTKQ14296 549 aaKnown RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 RASA2Q15283 850 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TSNQ15631 228 aaKnown RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CYP2A13Q16696 494 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TBC1D25Q3MII6 688 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 HES3Q5TGS1 186 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 UGT3A1Q6NUS8 523 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 FBXO38Q6PIJ6 1188 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 WDR74Q6RFH5 385 aaPredicted RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CLEC18BQ6UXF7 455 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ARHGAP22Q7Z5H3 698 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ISCA2Q86U28 154 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 FAM20CQ8IXL6 584 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 C2orf73Q8N5S3 287 aaPredicted RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 DCBLD1Q8N8Z6 715 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 AVL9Q8NBF6 648 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 CLEC18CQ8NCF0 446 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF248Q8NDW4 579 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 HMGCLL1Q8TB92 370 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF480Q8WV37 535 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 KCTD4Q8WVF5 259 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SKA2Q8WVK7 121 aaPredicted RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 LCN9Q8WX39 176 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ANKRD7Q92527 254 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SH3KBP1Q96B97 665 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 NXNL1Q96CM4 212 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 OR2A14Q96R47 310 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TMEM109Q9BVC6 243 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 DERL2Q9GZP9 239 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ZNF768Q9H5H4 540 aaKnown RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 SEMA5BQ9P283 1151 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 PSMC3IPQ9P2W1 217 aaPredicted RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 EPHA6Q9UF33 1036 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 PLAAQ9Y263 795 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 TDRKHQ9Y2W6 561 aaKnown RBP6.76□□□□□ -1.33
LIMD1-204ENST00000474665 ENTPD2Q9Y5L3 495 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 COLEC10Q9Y6Z7 277 aa6.76□□□□□ -1.33
LIMD1-204ENST00000474665 IGHV5-51A0A0C4DH38 117 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SMIM23A6NLE4 172 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 E7ENX8 843 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 RASGRF2O14827 1237 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 SLC16A5O15375 505 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CAPN5O15484 640 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 NRP2O60462 931 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 C8GP07360 202 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CHRM5P08912 532 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 THRAP10827 490 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 MTHFD2P13995 350 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CREB1P16220 341 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 POLR2CP19387 275 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 PSMB5P28074 263 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 IMPA1P29218 277 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CRABP2P29373 138 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TYK2P29597 1187 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CCNFP41002 786 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 MAPK9P45984 424 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 RGS4P49798 205 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 RAB28P51157 221 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 KPNA2P52292 529 aaKnown RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 UCNP55089 124 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TAP2Q03519 686 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 ILF2Q12905 390 aaKnown RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 CSHL1Q14406 222 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 C16orf72Q14CZ0 275 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 ZIC1Q15915 447 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 IGFBP7Q16270 282 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 ISXQ2M1V0 245 aa6.75□□□□□ -1.33
LIMD1-204ENST00000474665 C18orf21Q32NC0 220 aaPredicted RBP6.75□□□□□ -1.33
LIMD1-204ENST00000474665 TMEM71Q6P5X7 295 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms