RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CST6Q15828 149 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 MAPKAPK3Q16644 382 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 ZXDCQ2QGD7 858 aaPredicted RBP21.14■□□□□ 0.98
CCM2-206ENST00000474617 FAM156AQ8NDB6 213 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 PHC3Q8NDX5 983 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 WDR34Q96EX3 536 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 SLC45A3Q96JT2 553 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 MYADMQ96S97 322 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 CGREF1Q99674 301 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 SLC39A3Q9BRY0 314 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 LMCD1Q9NZU5 365 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 RAB26Q9ULW5 256 aa21.14■□□□□ 0.98
CCM2-206ENST00000474617 CHD7Q9P2D1 2997 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 TMEM202A6NGA9 273 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 PGRP06401 933 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 MSX2P35548 267 aaPredicted RBP21.14■□□□□ 0.97
CCM2-206ENST00000474617 GSK3BP49841 420 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 XKR6Q5GH73 641 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 PAGE2BQ5JRK9 111 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 ZNF648Q5T619 568 aaPredicted RBP21.14■□□□□ 0.97
CCM2-206ENST00000474617 EGFLAMQ63HQ2 1017 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 PNCKQ6P2M8 343 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 DLEU7Q6UYE1 221 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 TICAM1Q8IUC6 712 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 CFAP206Q8IYR0 622 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 SETD7Q8WTS6 366 aaKnown RBP21.14■□□□□ 0.97
CCM2-206ENST00000474617 EFCAB11Q9BUY7 163 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 COPS7BQ9H9Q2 264 aaPredicted RBP21.14■□□□□ 0.97
CCM2-206ENST00000474617 FARSBQ9NSD9 589 aaKnown RBP21.14■□□□□ 0.97
CCM2-206ENST00000474617 ATXN10Q9UBB4 475 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 ZNHIT2Q9UHR6 403 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 PCDHB3Q9Y5E6 796 aa21.14■□□□□ 0.97
CCM2-206ENST00000474617 DHRS12A0PJE2 317 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 ZNF839A8K0R7 811 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 GMNNO75496 209 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 MYO1DO94832 1006 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 PRPS1L1P21108 318 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 ITPKAP23677 461 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 IMPA1P29218 277 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 PREPP48147 710 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 METAP1P53582 386 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 MED21Q13503 144 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 NAE1Q13564 534 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 LAPTM5Q13571 262 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 GRM2Q14416 872 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 CAPRIN1Q14444 709 aaKnown RBP21.13■□□□□ 0.97
CCM2-206ENST00000474617 SGO1Q5FBB7 561 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 FAM219BQ5XKK7 198 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 ZNF776Q68DI1 518 aaPredicted RBP21.13■□□□□ 0.97
CCM2-206ENST00000474617 LPCAT2Q7L5N7 544 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 KIAA2013Q8IYS2 634 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 OXR1Q8N573 874 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 TMEM102Q8N9M5 508 aaPredicted RBP21.13■□□□□ 0.97
CCM2-206ENST00000474617 OR9A1PQ8NGU1 263 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 DNAJB14Q8TBM8 379 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 UBE2E3Q969T4 207 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 CCDC115Q96NT0 180 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 NECTIN4Q96NY8 510 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 HBEGFQ99075 208 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 PKP4Q99569 1192 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 C1QTNF7Q9BXJ2 289 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 ATG10Q9H0Y0 220 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 SPATA6Q9NWH7 488 aaPredicted RBP21.13■□□□□ 0.97
CCM2-206ENST00000474617 RUVBL1Q9Y265 456 aaKnown RBP21.13■□□□□ 0.97
CCM2-206ENST00000474617 MAN2B2Q9Y2E5 1009 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 COQ6Q9Y2Z9 468 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 TSC22D4Q9Y3Q8 395 aa21.13■□□□□ 0.97
CCM2-206ENST00000474617 EPOPA6NHQ4 379 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 KCNJ13O60928 360 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 POP7O75817 140 aaKnown RBP21.12■□□□□ 0.97
CCM2-206ENST00000474617 GRIA3P42263 894 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 LRRC74AQ0VAA2 488 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 ARHGAP19Q14CB8 494 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 LPCAT4Q643R3 524 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 ANO7Q6IWH7 933 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 FKBP9P1Q75LS8 142 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 CHPFQ8IZ52 775 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 PACRGLQ8N7B6 248 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 ZNF513Q8N8E2 541 aaPredicted RBP21.12■□□□□ 0.97
CCM2-206ENST00000474617 WDR20Q8TBZ3 569 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 PYCR2Q96C36 320 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 SGPP1Q9BX95 441 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 PLA2G2FQ9BZM2 168 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 S1PR5Q9H228 398 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 VPS29Q9UBQ0 182 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 SCOCQ9UIL1 159 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 SCML1Q9UN30 329 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 DYRK1BQ9Y463 629 aa21.12■□□□□ 0.97
CCM2-206ENST00000474617 DOCK8Q8NF50 2099 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 ARPC2O15144 300 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 SLC16A8O95907 504 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 BMP2P12643 396 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 AMD1P17707 334 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 DRD3P35462 400 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 ASMTP46597 345 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 SRSF11Q05519 484 aaKnown RBP21.11■□□□□ 0.97
CCM2-206ENST00000474617 SFSWAPQ12872 951 aaKnown RBP21.11■□□□□ 0.97
CCM2-206ENST00000474617 PTGR1Q14914 329 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 FAM174BQ3ZCQ3 159 aa21.11■□□□□ 0.97
CCM2-206ENST00000474617 AGBL4Q5VU57 503 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms