RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 VPS4AQ9UN37 437 aa19.56■□□□□ 0.72
PDLIM4-206ENST00000474421 A0A1B0GX78 115 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 CLEC18AA5D8T8 446 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 CTSBP07858 339 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 OGNP20774 298 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 ALAS2P22557 587 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 VARSP26640 1264 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 ARNTP27540 789 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 ATP5DP30049 168 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 CXCR5P32302 372 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 MAGEA6P43360 314 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 GRM7Q14831 915 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 NAA25Q14CX7 972 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 TYSND1Q2T9J0 566 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 NADK2Q4G0N4 442 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 VWA5B1Q5TIE3 1220 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 KIAA0930Q6ICG6 404 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 MRPL14Q6P1L8 145 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 CLEC18BQ6UXF7 455 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 TAX1BP1Q86VP1 789 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 PRELID2Q8N945 189 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 LMNTD1Q8N9Z9 388 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 CLEC18CQ8NCF0 446 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 GALNT11Q8NCW6 608 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 HMGCLL1Q8TB92 370 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 LPGAT1Q92604 370 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 FKBP10Q96AY3 582 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 SMAD5Q99717 465 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 NUDT9Q9BW91 350 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 ENAMQ9NRM1 1142 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 ANKMY1Q9P2S6 941 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 CIDEBQ9UHD4 219 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 KLHL20Q9Y2M5 609 aa19.55■□□□□ 0.72
PDLIM4-206ENST00000474421 ALPPP05187 535 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 FMO4P31512 558 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 GCGRP47871 477 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 GPS1Q13098 491 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 KCNJ11Q14654 390 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 CTSL3PQ5NE16 218 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 FCRL6Q6DN72 434 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 CES3Q6UWW8 571 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 TTLL10Q6ZVT0 673 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 TTC29Q8NA56 475 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 BIRC8Q96P09 236 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 SELENOSQ9BQE4 189 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 IL1RAPL1Q9NZN1 696 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 SPATA7Q9P0W8 599 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 SAMD15Q9P1V8 674 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 PPP2R2CQ9Y2T4 447 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 FAM169AQ9Y6X4 670 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 PRRC2CQ9Y520 2896 aaKnown RBP19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 PCM1Q15154 2024 aa19.54■□□□□ 0.72
PDLIM4-206ENST00000474421 TCRBV7S3A2A0A539 114 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 MAGEB16A2A368 324 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 DSCR3O14972 297 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 PRICKLE3O43900 615 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 SRPX2O60687 465 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 SORBS2O94875 1100 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 ONECUT2O95948 504 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 ALBP02768 609 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 BDKRB1P46663 353 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 CCZ1BP86790 482 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 CCZ1P86791 482 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 SLC9A5Q14940 896 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 TRIP13Q15645 432 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 CYP2A13Q16696 494 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 FAM214AQ32MH5 1076 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 DCAF10Q5QP82 559 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 JMJD6Q6NYC1 403 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 CASC4Q6P4E1 433 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 CNSTQ6PJW8 725 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 NAP1L3Q99457 506 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 WDR54Q9H977 334 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 SLAMF7Q9NQ25 335 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 P4HTMQ9NXG6 502 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 KLK4Q9Y5K2 254 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 NFS1Q9Y697 457 aa19.53■□□□□ 0.72
PDLIM4-206ENST00000474421 GOLGA8KD6RF30 607 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 GOLGA8TH3BQL2 631 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 MATN4O95460 622 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 ATXN8OSP0DMR3 200 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 MLNP12872 115 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 CHRM3P20309 590 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 GRIA3P42263 894 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 VPS41P49754 854 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 NEPROQ6NW34 567 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 OVCH1Q7RTY7 1134 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 GALNT16Q8N428 558 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 MAGOHBQ96A72 148 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 PNPLA2Q96AD5 504 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 PBKQ96KB5 322 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 ZNF285Q96NJ3 590 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 XAB2Q9HCS7 855 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 FAM114A2Q9NRY5 505 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 CUTCQ9NTM9 273 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 INTS10Q9NVR2 710 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 NXT1Q9UKK6 140 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 CRYL1Q9Y2S2 319 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 JRKLQ9Y4A0 524 aa19.52■□□□□ 0.72
PDLIM4-206ENST00000474421 MAP4K5Q9Y4K4 846 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms