RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 C10orf71Q711Q0 1435 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 TRIOO75962 3097 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 MROH7-TTC4A0A0A0MT08 1334 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ZMYM6O95789 1325 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 MROH5Q6ZUA9 1318 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ZNF532Q9HCE3 1301 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 MEX3AA1L020 520 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ANKRD18BA2A2Z9 1011 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 FAM220BPB1ANY3 271 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 E7EWF7 191 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 H0Y9J4 135 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 HIP1O00291 1037 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 RNF113AO15541 343 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 KCNN4O15554 427 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 IDH3BO43837 385 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 GPR137BO60478 399 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 NGFP01138 241 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 HSPD1P10809 573 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 GJB2P29033 226 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 UBA7P41226 1012 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 GPD2P43304 727 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 GYG1P46976 350 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CDH15P55291 814 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CLDN20P56880 219 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 GSDMDP57764 484 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 HAND2P61296 217 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 SP3Q02447 781 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 DRP2Q13474 957 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 SLC12A1Q13621 1099 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 DHX8Q14562 1220 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 RNPS1Q15287 305 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CCDC57Q2TAC2 916 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 MCMDC2Q4G0Z9 681 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 PARP10Q53GL7 1025 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 TXNDC8Q6A555 127 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 PRR5LQ6MZQ0 368 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 SLC22A25Q6T423 547 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CASC1Q6TDU7 716 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 FIP1L1Q6UN15 594 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 IL27RAQ6UWB1 636 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 VITQ6UXI7 678 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 PQLC2Q6ZP29 291 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 QSOX2Q6ZRP7 698 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CLEC17AQ6ZS10 378 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CHST3Q7LGC8 479 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 RTN4RL2Q86UN3 420 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 SPATA5Q8NB90 893 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 OR2T12Q8NG77 320 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 MORC4Q8TE76 937 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 SLC44A1Q8WWI5 657 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ELP4Q96EB1 424 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 OXNAD1Q96HP4 312 aaPredicted RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 SDHCQ99643 169 aaPredicted RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 REEP2Q9BRK0 252 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 H2AFJQ9BTM1 129 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 UTP14AQ9BVJ6 771 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 PHF7Q9BWX1 381 aaPredicted RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 TEX13AQ9BXU3 409 aaPredicted RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 AGXT2Q9BYV1 514 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 FTOQ9C0B1 505 aaKnown RBP eCLIP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 TTYH1Q9H313 450 aaPredicted RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ACSS1Q9NUB1 689 aaPredicted RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 HMG20BQ9P0W2 317 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 HSPB7Q9UBY9 170 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 NARFQ9UHQ1 456 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 TRMT112Q9UI30 125 aaKnown RBP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 NIP7Q9Y221 180 aaKnown RBP eCLIP1.49□□□□□ -2.17
CCDC39-203ENST00000473854 CEPT1Q9Y6K0 416 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 PRUNE2Q8WUY3 3088 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ZNF236Q9UL36 1845 aa1.49□□□□□ -2.17
CCDC39-203ENST00000473854 ROBO3Q96MS0 1386 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SCN4AP35499 1836 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 VCANP13611 3396 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 MYO18AQ92614 2054 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 GOLGA6L10A0A0M3HER8 536 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 VPS37CA5D8V6 355 aaPredicted RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 C5orf60A6NFR6 353 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 ACOD1A6NK06 481 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 VCYO14598 125 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 IRAK2O43187 625 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 FIBPO43427 364 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PRKAB2O43741 272 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 STX6O43752 255 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SYNCRIPO60506 623 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 RANBP6O60518 1105 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PFKFB2O60825 505 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 GUCY1B2O75343 617 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 IDH1O75874 414 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 MBD4O95243 580 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 HSP90AA1P07900 732 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 FDPSP14324 419 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 GP9P14770 177 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 ATP6V1B1P15313 513 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 SYT1P21579 422 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 EPHA2P29317 976 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 TM4SF1P30408 202 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 ZFP36L2P47974 494 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 GNAQP50148 359 aa1.48□□□□□ -2.17
CCDC39-203ENST00000473854 PAPOLAP51003 745 aaKnown RBP1.48□□□□□ -2.17
CCDC39-203ENST00000473854 ARL4CP56559 192 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms