RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 AICDAQ9GZX7 198 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 TUBB1Q9H4B7 451 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SLC6A20Q9NP91 592 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 KCNK9Q9NPC2 374 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SLCO1B3Q9NPD5 702 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 TMEM9Q9P0T7 183 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SPATA7Q9P0W8 599 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 ZNF490Q9ULM2 529 aaPredicted RBP9.56□□□□□ -0.88
SF3A1-207ENST00000471342 RNF112Q9ULX5 631 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 SLC22A14Q9Y267 594 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 WDFY3Q8IZQ1 3526 aa9.56□□□□□ -0.88
SF3A1-207ENST00000471342 ZFC3H1O60293 1989 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 IGHV1OR21-1A0A087WYE8 117 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 WDR91A4D1P6 747 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 F8W8V4 182 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 NTN3O00634 580 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 YKT6O15498 198 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 TNFSF14O43557 240 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 SH3BP5O60239 455 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 TRIM13O60858 407 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CER1O95813 267 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 JUNP05412 331 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ANXA6P08133 673 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 SYPP08247 313 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CHRM5P08912 532 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CKMT1AP12532 417 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 EEF1DP29692 281 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 MDH1P40925 334 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CASP2P42575 452 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ARRB1P49407 418 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 RAB28P51157 221 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 KPNA2P52292 529 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 OR1D5P58170 312 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 TBPL1P62380 186 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 HHEXQ03014 270 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 BST1Q10588 318 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 NAE1Q13564 534 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CATSPEREQ5SY80 951 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 LIPMQ5VYY2 423 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 KIAA1614Q5VZ46 1190 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 FCRL6Q6DN72 434 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ADNP2Q6IQ32 1131 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ZCCHC8Q6NZY4 707 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 LETMD1Q6P1Q0 360 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 FRMD7Q6ZUT3 714 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 GOLGA7Q7Z5G4 137 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 SYVN1Q86TM6 617 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 FBXO39Q8N4B4 442 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ARHGEF39Q8N4T4 335 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ABHD11Q8NFV4 315 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 OR4E2Q8NGC2 313 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 MCOLN3Q8TDD5 553 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 AGAP11Q8TF27 550 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 NEIL2Q969S2 332 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 RUFY1Q96T51 708 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 SELENOSQ9BQE4 189 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 NUSAP1Q9BXS6 441 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 DRC3Q9H069 523 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 RAB33BQ9H082 229 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 STMN4Q9H169 189 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ABCG4Q9H172 646 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 TRIT1Q9H3H1 467 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ENAMQ9NRM1 1142 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CUEDC1Q9NWM3 386 aaPredicted RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ARL15Q9NXU5 204 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 EPHA6Q9UF33 1036 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ZDHHC2Q9UIJ5 367 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 GMEB2Q9UKD1 530 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 PILRAQ9UKJ1 303 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 PADI4Q9UM07 663 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 CCL27Q9Y4X3 112 aa9.55□□□□□ -0.88
SF3A1-207ENST00000471342 TDRD6O60522 2096 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 ASCC3Q8N3C0 2202 aaKnown RBP9.55□□□□□ -0.88
SF3A1-207ENST00000471342 COL5A1P20908 1838 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 RIF1Q5UIP0 2472 aaKnown RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 A0A1W2PNU3 283 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 GOLGA6L10A6NI86 522 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 C4orf47A7E2U8 309 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SUPT3HB4E1H0 165 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 IFRD1O00458 451 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 KIF1CO43896 1103 aaKnown RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 NPHS1O60500 1241 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SHOX2O60902 331 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SUPT3HO75486 399 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 C9P02748 559 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 MYL2P10916 166 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 PNLIPP16233 465 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 GLB1P16278 677 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 ACP1P24666 158 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 GCGRP47871 477 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 ACADVLP49748 655 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 HNMTP50135 292 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 LIMK1P53667 647 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 SLC14A1Q13336 389 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 CHI3L2Q15782 390 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 ARL13AQ5H913 290 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 NKAIN2Q5VXU1 208 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 ANKS6Q68DC2 871 aa9.54□□□□□ -0.88
SF3A1-207ENST00000471342 TTC19Q6DKK2 380 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-207ENST00000471342 METTL2BQ6P1Q9 378 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms