RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 NXT1Q9UKK6 140 aaKnown RBP12.53□□□□□ -0.4
PTPN7-207ENST00000468385 CCDC162PA2VCL2 907 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 FITM1A5D6W6 292 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 MROH6A6NGR9 719 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 OR1I1O60431 355 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 JRKO75564 520 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 METTL18O95568 372 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 OR56A5P0C7T3 313 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 CD9P21926 228 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 TDGF1P3P51864 188 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 CSE1LP55060 971 aaKnown RBP12.52□□□□□ -0.41
PTPN7-207ENST00000468385 GRM7Q14831 915 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
PTPN7-207ENST00000468385 ZNF324BQ6AW86 544 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-207ENST00000468385 AADACL2Q6P093 401 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 FIGLAQ6QHK4 219 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 TAX1BP1Q86VP1 789 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 VRK3Q8IV63 474 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 CNGA4Q8IV77 575 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 SLC22A15Q8IZD6 547 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 C2orf73Q8N5S3 287 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-207ENST00000468385 METTL27Q8N6F8 245 aaPredicted RBP12.52□□□□□ -0.41
PTPN7-207ENST00000468385 BCORP1Q8N888 145 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 RELTQ969Z4 430 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 IL17FQ96PD4 163 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 LMF1Q96S06 567 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 LRRC40Q9H9A6 602 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 COPG2Q9UBF2 871 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 CIDEBQ9UHD4 219 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 OTOGQ6ZRI0 2925 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 ZGRF1Q86YA3 2104 aa12.52□□□□□ -0.41
PTPN7-207ENST00000468385 FBN2P35556 2912 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 MED26O95402 600 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 S1PR4O95977 384 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 GRNP28799 593 aaKnown RBP12.51□□□□□ -0.41
PTPN7-207ENST00000468385 CCR7P32248 378 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 ZC3H12BQ5HYM0 836 aaKnown RBP12.51□□□□□ -0.41
PTPN7-207ENST00000468385 TCTE1Q5JU00 501 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 ARHGEF18Q6ZSZ5 1173 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 TTC29Q8NA56 475 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-207ENST00000468385 OR1N1Q8NGS0 311 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 SLC22A18Q96BI1 424 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 VPS50Q96JG6 964 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 TAAR6Q96RI8 345 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 SELENOSQ9BQE4 189 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 INTS7Q9NVH2 962 aaKnown RBP12.51□□□□□ -0.41
PTPN7-207ENST00000468385 IL1RAPL1Q9NZN1 696 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.51□□□□□ -0.41
PTPN7-207ENST00000468385 PCDHA13Q9Y5I0 950 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 MAU2Q9Y6X3 613 aa12.51□□□□□ -0.41
PTPN7-207ENST00000468385 APCP25054 2843 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 HEATR9A2RTY3 570 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 AKR1B15C9JRZ8 316 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-207ENST00000468385 PCDH17O14917 1159 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 PRICKLE3O43900 615 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-207ENST00000468385 GPC4O75487 556 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 HPP00738 406 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 SOX11P35716 441 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 KCNK10P57789 538 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 KLC1Q07866 573 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 HSPA14Q0VDF9 509 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 TBX2Q13207 712 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-207ENST00000468385 ART3Q13508 389 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 SF1Q15637 639 aaKnown RBP12.5□□□□□ -0.41
PTPN7-207ENST00000468385 CCDC38Q502W7 563 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 DCUN1D3Q8IWE4 304 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 OR13J1Q8NGT2 312 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 OR2L8Q8NGY9 312 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 LKAAEAR1Q8TD35 194 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 ITLN2Q8WWU7 325 aaPredicted RBP12.5□□□□□ -0.41
PTPN7-207ENST00000468385 PSMF1Q92530 271 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 ALS2CR12Q96Q35 445 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 CRB3Q9BUF7 120 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 ZNF160Q9HCG1 818 aa12.5□□□□□ -0.41
PTPN7-207ENST00000468385 IQCF5A8MTL0 148 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 MAP2K7O14733 419 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 RASGRF2O14827 1237 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 CTSVO60911 334 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 ZNF189O75820 626 aaPredicted RBP12.49□□□□□ -0.41
PTPN7-207ENST00000468385 TJP3O95049 919 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 GOT2P00505 430 aaKnown RBP12.49□□□□□ -0.41
PTPN7-207ENST00000468385 ZGLP1P0C6A0 271 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 ACPPP15309 386 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 CARSP49589 748 aaKnown RBP12.49□□□□□ -0.41
PTPN7-207ENST00000468385 TNFSF10P50591 281 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 GDF10P55107 478 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 RWDD2BP57060 319 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 VSX2P58304 361 aaPredicted RBP12.49□□□□□ -0.41
PTPN7-207ENST00000468385 ARG2P78540 354 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 FAM214AQ32MH5 1076 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 WASHC2DQ5SRD0 308 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 UNC5DQ6UXZ4 953 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 NLRP9Q7RTR0 991 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 FAM71DQ8N9W8 422 aa12.49□□□□□ -0.41
PTPN7-207ENST00000468385 CFAP61Q8NHU2 1237 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms