RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 HMGB1P1B2RPK0 211 aaPredicted RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 TARM1B6A8C7 271 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 E7ENX8 843 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 NTN3O00634 580 aaPredicted RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 PRPF4O43172 522 aaKnown RBP eCLIP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 TYROBPO43914 113 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 KLK8O60259 260 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 PLIN3O60664 434 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 SPAG7O75391 227 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 PROCP04070 461 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 MTHFD2P13995 350 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 CREB1P16220 341 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 POLR2CP19387 275 aaPredicted RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 ALDH18A1P54886 795 aaKnown RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 MAGOHP61326 146 aaKnown RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 TBPL1P62380 186 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 SIM1P81133 766 aaPredicted RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 TAP2Q03519 686 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 SPIDRQ14159 915 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 FASTKQ14296 549 aaKnown RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 CCDC157Q569K6 752 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 NKAIN2Q5VXU1 208 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 CAPN13Q6MZZ7 669 aaPredicted RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 FBXO39Q8N4B4 442 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 TMEM151AQ8N4L1 468 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 OR56A3Q8NH54 315 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 TCP10LQ8TDR4 215 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 MED8Q96G25 268 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 GFM1Q96RP9 751 aaKnown RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 CD180Q99467 661 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 NRTNQ99748 197 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 PCBD2Q9H0N5 130 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 ATG10Q9H0Y0 220 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 ACTR10Q9NZ32 417 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 WWOXQ9NZC7 414 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 PTBP2Q9UKA9 531 aaKnown RBP14.71□□□□□ -0.05
SNIP1-202ENST00000468040 EMCNQ9ULC0 261 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 PCDHB11Q9Y5F2 797 aa14.71□□□□□ -0.05
SNIP1-202ENST00000468040 MN1Q10571 1320 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 PTPRZ1P23471 2315 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 ISM1B1AKI9 464 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 D6RAR5 112 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 TM9SF1O15321 606 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 CAPN5O15484 640 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 DKK1O94907 266 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 ZWINTO95229 277 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 FKBP9O95302 570 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 FTH1P19P0C7X4 201 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 OAS2P29728 719 aaKnown RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 CSF2RBP32927 897 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 RPA3P35244 121 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 GGT5P36269 586 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 NFKB2Q00653 900 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 NAE1Q13564 534 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 TSTA3Q13630 321 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 SETDB1Q15047 1291 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 PFKFB4Q16877 469 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 IRGCQ6NXR0 463 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 TMEM71Q6P5X7 295 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 USP53Q70EK8 1073 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 TAX1BP1Q86VP1 789 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 LRRC56Q8IYG6 542 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 CARFQ8N187 725 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 C2orf73Q8N5S3 287 aaPredicted RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 CCDC63Q8NA47 563 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 PPFIBP2Q8ND30 876 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 UBTD2Q8WUN7 234 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 ARL8AQ96BM9 186 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 CCDC126Q96EE4 140 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 SGPP1Q9BX95 441 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 SPHK1Q9NYA1 384 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 POMT2Q9UKY4 750 aa14.7□□□□□ -0.06
SNIP1-202ENST00000468040 TNPO3Q9Y5L0 923 aaKnown RBP14.7□□□□□ -0.06
SNIP1-202ENST00000468040 A0A1W2PPV9 198 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 STX16-NPEPL1H3BU86 382 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 STX16O14662 325 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 CCNDBP1O95273 360 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 KCNK5O95279 499 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 C9P02748 559 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 SBK3P0C264 359 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 MYL2P10916 166 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 CPA3P15088 417 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 UGT2B7P16662 529 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 ATP5F1P24539 256 aaPredicted RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 PRDX3P30048 256 aaKnown RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 SLC6A12P48065 614 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 GPS2Q13227 327 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 NAA25Q14CX7 972 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 PTCHD3Q3KNS1 767 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 HSP90B2PQ58FF3 399 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 TTMPQ5BVD1 217 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 THEMIS2Q5TEJ8 643 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 PRAMEF13Q5VWM6 474 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 METTL2BQ6P1Q9 378 aaKnown RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 SPESP1Q6UW49 350 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 SUSD1Q6UWL2 747 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 ZYG11AQ6WRX3 759 aa14.69□□□□□ -0.06
SNIP1-202ENST00000468040 RBM44Q6ZP01 1051 aaKnown RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 RAB44Q7Z6P3 723 aaPredicted RBP14.69□□□□□ -0.06
SNIP1-202ENST00000468040 SLC22A9Q8IVM8 553 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms