RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DTX3LQ8TDB6 740 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 LINC00615Q96LM1 132 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-203ENST00000467533 SIGLEC12Q96PQ1 595 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 COG4Q9H9E3 785 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF304Q9HCX3 659 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 RASSF1Q9NS23 344 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 ANKRD10Q9NXR5 420 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 TAB2Q9NYJ8 693 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 GNPTGQ9UJJ9 305 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 KLHL20Q9Y2M5 609 aa9.75□□□□□ -0.85
HDAC3-203ENST00000467533 A8MUI8 341 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 BUD23O43709 281 aaKnown RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 CD48P09326 243 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 MX2P20592 715 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 HOXC12P31275 282 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 PTGER1P34995 402 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 PTGS2P35354 604 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 ST13P50502 369 aaKnown RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 EMP2P54851 167 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 TUBA3CQ13748 450 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 NOMO1Q15155 1222 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 OR1C1Q15619 314 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 TCTE1Q5JU00 501 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 CCDC183Q5T5S1 534 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 FCRLBQ6BAA4 426 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF449Q6P9G9 518 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 TUBA3EQ6PEY2 450 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 CHSY3Q70JA7 882 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 GLT6D1Q7Z4J2 308 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 GALNTL5Q7Z4T8 443 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 PHC2Q8IXK0 858 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 CPSF7Q8N684 471 aaKnown RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 CNTD1Q8N815 330 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 MDS2Q8NDY4 140 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 FLVCR1-AS1Q8TAF5 88 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 FAM57AQ8TBR7 257 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 TFGQ92734 400 aaPredicted RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 IMP4Q96G21 291 aaKnown RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 SCMH1Q96GD3 660 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 DCUN1D1Q96GG9 259 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 SEC16BQ96JE7 1060 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 OR52A5Q9H2C5 316 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 TDRKHQ9Y2W6 561 aaKnown RBP9.74□□□□□ -0.85
HDAC3-203ENST00000467533 PKP3Q9Y446 797 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 SCINQ9Y6U3 715 aa9.74□□□□□ -0.85
HDAC3-203ENST00000467533 A0A1W2PQ72 361 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 RCCD1A6NED2 376 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 GAPDHSO14556 408 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-203ENST00000467533 SGTAO43765 313 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 ATE1O95260 518 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 RALBP11234 206 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 ICAM2P13598 275 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 FBLP22087 321 aaKnown RBP9.73□□□□□ -0.85
HDAC3-203ENST00000467533 CD151P48509 253 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 PRLHRP49683 370 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 ARSEP51690 589 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 IFI35P80217 286 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-203ENST00000467533 GBE1Q04446 702 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 FAM214AQ32MH5 1076 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 FBXW10Q5XX13 1052 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 AMER2Q8N7J2 671 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 OR5AR1Q8NGP9 310 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 SPATA22Q8NHS9 363 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF398Q8TD17 642 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 BLOC1S5Q8TDH9 187 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 COX4I2Q96KJ9 171 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF354BQ96LW1 612 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 ZNF830Q96NB3 372 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-203ENST00000467533 SELENOSQ9BQE4 189 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 UTP23Q9BRU9 249 aaKnown RBP9.73□□□□□ -0.85
HDAC3-203ENST00000467533 YIPF2Q9BWQ6 316 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 TP63Q9H3D4 680 aaPredicted RBP9.73□□□□□ -0.85
HDAC3-203ENST00000467533 TRABDQ9H4I3 376 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 NEUROD4Q9HD90 331 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 MYO1AQ9UBC5 1043 aa9.73□□□□□ -0.85
HDAC3-203ENST00000467533 PHF3Q92576 2039 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 USP27XA6NNY8 438 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 CDC40O60508 579 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 HEXBP07686 556 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 PDHA2P29803 388 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 PEBP1P30086 187 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 GJC1P36383 396 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 SSR1P43307 286 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 TNNT3P45378 269 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 DLX5P56178 289 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 SLC25A11Q02978 314 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 SNTB1Q13884 538 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 DPYSL3Q14195 570 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 FASTKQ14296 549 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 KIR2DS3Q14952 304 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 ZC3H12BQ5HYM0 836 aaKnown RBP9.72□□□□□ -0.85
HDAC3-203ENST00000467533 ACER2Q5QJU3 275 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 FKBP15Q5T1M5 1219 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 SPINK14Q6IE38 97 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 PRMT9Q6P2P2 845 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 ARSKQ6UWY0 536 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 LAPTM4BQ86VI4 370 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 KRTAP1-3Q8IUG1 177 aa9.72□□□□□ -0.85
HDAC3-203ENST00000467533 RPRMLQ8N4K4 120 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms