RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 CSH2P0DML3 217 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 POLR2EP19388 210 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ITGAXP20702 1163 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 MMP8P22894 467 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ELAVL4P26378 380 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 MGAT1P26572 445 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 NMT1P30419 496 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 BSGP35613 385 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 GNL1P36915 607 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 CDKN2BP42772 138 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ABCG1P45844 678 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RPS9P46781 194 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 GABRB2P47870 512 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 BCAP31P51572 246 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ARSEP51690 589 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 STAT5BP51692 787 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 HNRNPFP52597 415 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ZNF132P52740 706 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TMBIM6P55061 237 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 MYL6P60660 151 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PSMC1P62191 440 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ADAM8P78325 824 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TAP2Q03519 686 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ZBTB16Q05516 673 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RIPPLY1Q0D2K3 151 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PDIA2Q13087 525 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 CHAF1BQ13112 559 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 AIMP2Q13155 320 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 DUSP8Q13202 625 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 MRPL49Q13405 166 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 TUBA3CQ13748 450 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 NFYCQ13952 458 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TFDP1Q14186 410 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PIGHQ14442 188 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 FASTKD3Q14CZ7 662 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 RPS6KA2Q15349 733 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 INAQ16352 499 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 P3H1Q32P28 736 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 LSM12Q3MHD2 195 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 TFDP3Q5H9I0 405 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DCAF17Q5H9S7 520 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 NHSL2Q5HYW2 709 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PLEKHS1Q5SXH7 462 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RARS2Q5T160 578 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 CCNJQ5T5M9 372 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TEDDM1Q5T9Z0 273 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 AGBL4Q5VU57 503 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CES4AQ5XG92 561 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 STEAP4Q687X5 459 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 SFRP4Q6FHJ7 346 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ABLIM2Q6H8Q1 611 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CES5AQ6NT32 575 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 C8orf82Q6P1X6 216 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 DENND1BQ6P3S1 775 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 C11orf88Q6PI97 169 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TSSK4Q6SA08 328 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 KLHL24Q6TFL4 600 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 EPGNQ6UW88 154 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 HACD2Q6Y1H2 254 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CDHR3Q6ZTQ4 885 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 SEPT14Q6ZU15 432 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 SLC47A2Q86VL8 602 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CCDC25Q86WR0 208 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 THNSL1Q8IYQ7 743 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ADGRF4Q8IZF3 695 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PGAM4Q8N0Y7 254 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DAW1Q8N136 415 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PDIK1LQ8N165 341 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 C4orf33Q8N1A6 199 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TTC30BQ8N4P2 665 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PTGR2Q8N8N7 351 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ANKFN1Q8N957 763 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DBF4BQ8NFT6 615 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TSPAN14Q8NG11 270 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RP9Q8TA86 221 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 FEZF2Q8TBJ5 459 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TBC1D15Q8TC07 691 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 TFB1MQ8WVM0 346 aaKnown RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 OVCA2Q8WZ82 227 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 TFAP2CQ92754 450 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CASP10Q92851 521 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CLDN23Q96B33 292 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DYNLL2Q96FJ2 89 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 VMP1Q96GC9 406 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DCUN1D1Q96GG9 259 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 LOXL4Q96JB6 756 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 SERAC1Q96JX3 654 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 PWWP2AQ96N64 755 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 DACH2Q96NX9 599 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 KLHL5Q96PQ7 755 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ACCSQ96QU6 501 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 CYP2S1Q96SQ9 504 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 RIT2Q99578 217 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 ADPGKQ9BRR6 497 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 MTG1Q9BT17 334 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 GBA3Q9H227 469 aa3.39□□□□□ -1.87
SORT1-202ENST00000466471 FAM124BQ9H5Z6 455 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 ZNF552Q9H707 407 aaPredicted RBP3.39□□□□□ -1.87
SORT1-202ENST00000466471 SYNPO2LQ9H987 977 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms