RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 KLK10O43240 276 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 SLU7O95391 586 aaKnown RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 GUCA1CO95843 209 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 MAGP20916 626 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 IMPA1P29218 277 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 OAS2P29728 719 aaKnown RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 SPRP35270 261 aaPredicted RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 GRIA3P42263 894 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 PMS2P54278 862 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 PNLIPRP1P54315 467 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 POU4F1Q01851 419 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 CLN3Q13286 438 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 SLC5A12Q1EHB4 618 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 ZXDCQ2QGD7 858 aaPredicted RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 FCRL6Q6DN72 434 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 CEACAM20Q6UY09 585 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 CEP128Q6ZU80 1094 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 KMT5CQ86Y97 462 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 LRRC56Q8IYG6 542 aaPredicted RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 SYTL1Q8IYJ3 562 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 RAB42Q8N4Z0 105 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 C19orf47Q8N9M1 422 aaKnown RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 OR2A1Q8NGT9 310 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 KCNE4Q8WWG9 221 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 ZNF501Q96CX3 271 aaPredicted RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 CRELD1Q96HD1 420 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 CYTH2Q99418 400 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 DDA1Q9BW61 102 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 RAB11FIP5Q9BXF6 653 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 SLC12A9Q9BXP2 914 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 TSPYL1Q9H0U9 437 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 ACSS3Q9H6R3 686 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 PARVBQ9HBI1 364 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 SYTL2Q9HCH5 934 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 FGF21Q9NSA1 209 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 STOX2Q9P2F5 926 aaPredicted RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 TAC3Q9UHF0 121 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 PCDHGA3Q9Y5H0 932 aa11.24□□□□□ -0.61
CUX1-207ENST00000465461 SNRNP200O75643 2136 aaKnown RBP11.24□□□□□ -0.61
CUX1-207ENST00000465461 CHD8Q9HCK8 2581 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 ASPMQ8IZT6 3477 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 CEP295Q9C0D2 2601 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 IGF2RP11717 2491 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 TMEM150CB9EJG8 249 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 STK17BO94768 372 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 KIAA0754O94854 1291 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 WISP3O95389 354 aaPredicted RBP11.23□□□□□ -0.61
CUX1-207ENST00000465461 NTRK1P04629 796 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 C8GP07360 202 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 CCDC166P0CW27 439 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 ERGP11308 486 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 FGF5P12034 268 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 STMN1P16949 149 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 CYP2A7P20853 494 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 RAB15P59190 212 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 RAB10P61026 200 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 DLG1Q12959 904 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 CSHL1Q14406 222 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 C18orf21Q32NC0 220 aaPredicted RBP11.23□□□□□ -0.61
CUX1-207ENST00000465461 TMTC4Q5T4D3 741 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 LRRC8EQ6NSJ5 796 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 PWWP2BQ6NUJ5 590 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 RAPH1Q70E73 1250 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 TIPARPQ7Z3E1 657 aaKnown RBP11.23□□□□□ -0.61
CUX1-207ENST00000465461 VASH2Q86V25 355 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 PPP1R3BQ86XI6 285 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 SPACA3Q8IXA5 215 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 NKAPQ8N5F7 415 aaKnown RBP11.23□□□□□ -0.61
CUX1-207ENST00000465461 FBXO15Q8NCQ5 510 aaPredicted RBP11.23□□□□□ -0.61
CUX1-207ENST00000465461 ZNF248Q8NDW4 579 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 OR2L3Q8NG85 312 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 OR1L3Q8NH93 324 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 HMGCLL1Q8TB92 370 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 MCOLN3Q8TDD5 553 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 FCRL4Q96PJ5 515 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 FUT8Q9BYC5 575 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 TXLNGYQ9BZA5 131 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 ULBP3Q9BZM4 244 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 SPRTNQ9H040 489 aaPredicted RBP11.23□□□□□ -0.61
CUX1-207ENST00000465461 PDE7BQ9NP56 450 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 SLC6A20Q9NP91 592 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 RARRES3Q9UL19 164 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 BTRCQ9Y297 605 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 PCDHB11Q9Y5F2 797 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 ANKRD12Q6UB98 2062 aa11.23□□□□□ -0.61
CUX1-207ENST00000465461 WDFY3Q8IZQ1 3526 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 A0A087WUV0 522 aaPredicted RBP11.22□□□□□ -0.61
CUX1-207ENST00000465461 E7ENX8 843 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 SLC16A5O15375 505 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 RIPK2O43353 540 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 HIST1H2AGP0C0S8 130 aaPredicted RBP11.22□□□□□ -0.61
CUX1-207ENST00000465461 CD1DP15813 335 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 HIST1H2ADP20671 130 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
CUX1-207ENST00000465461 MAP1BP46821 2468 aaKnown RBP11.22□□□□□ -0.61
CUX1-207ENST00000465461 GABRA4P48169 554 aa11.22□□□□□ -0.61
CUX1-207ENST00000465461 VSNL1P62760 191 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms