RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 MATN2O00339 956 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 QSOX1O00391 747 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 FCHO1O14526 889 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ZBTB14O43829 449 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 SFTPCP11686 197 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 LHCGRP22888 699 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 SPINT3P49223 89 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 NCALDP61601 193 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 HERVK_113P63132 956 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 CCL7P80098 99 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ELP6Q0PNE2 266 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 CHRNA6Q15825 494 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 NEK5Q6P3R8 708 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 PAQR3Q6TCH7 311 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 FRMD7Q6ZUT3 714 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ACAD11Q709F0 780 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ADAMTSL2Q86TH1 951 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 NRSN1Q8IZ57 195 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 SPATA6LQ8N4H0 392 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 CCNYL1Q8N7R7 359 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 KLHL29Q96CT2 875 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 RAB3IPQ96QF0 476 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ATOH8Q96SQ7 321 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 COPS8Q99627 209 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ERVK-6Q9BXR3 956 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 SLC17A9Q9BYT1 436 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 LRMDAQ9H2I8 198 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 APOBEC3BQ9UH17 382 aaKnown RBP13.49□□□□□ -0.25
HDAC6-215ENST00000465457 PRDM4Q9UKN5 801 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 RNF112Q9ULX5 631 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 PADI4Q9UM07 663 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ITM2BQ9Y287 266 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 LOXL2Q9Y4K0 774 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 CAPN7Q9Y6W3 813 aa13.49□□□□□ -0.25
HDAC6-215ENST00000465457 ARHGEF17Q96PE2 2063 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-215ENST00000465457 C9orf172C9J069 976 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 STX16-NPEPL1H3BU86 382 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 STX16O14662 325 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 SLC22A2O15244 555 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 OR1I1O60431 355 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 NIPSNAP2O75323 286 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 RPLP0P05388 317 aaKnown RBP13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CBSLP0DN79 551 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CALB2P22676 271 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 ITGB7P26010 798 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CBSP35520 551 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CASRP41180 1078 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CDKN1CP49918 316 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CLCN7P51798 805 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 MNAT1P51948 309 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 POLE2P56282 527 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 PTSQ03393 145 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 ARSIQ5FYB1 569 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 EPGNQ6UW88 154 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 ERN2Q76MJ5 926 aaKnown RBP13.48□□□□□ -0.25
HDAC6-215ENST00000465457 TSPAN33Q86UF1 283 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 DTX1Q86Y01 620 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 ZNF781Q8N8C0 355 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 GPR26Q8NDV2 337 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 NAT6Q93015 286 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 PMEPA1Q969W9 287 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 PTERQ96BW5 349 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 TMEM237Q96Q45 408 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 ZSCAN5AQ9BUG6 496 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 ZNF395Q9H8N7 513 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-215ENST00000465457 LATS2Q9NRM7 1088 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 PNPOQ9NVS9 261 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 STK38LQ9Y2H1 464 aa13.48□□□□□ -0.25
HDAC6-215ENST00000465457 CSMD1Q96PZ7 3565 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 IGLV3-16A0A075B6K0 115 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 ANKRD65E5RJM6 399 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 BTN3A1O00481 513 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 ZNF195O14628 629 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 KPNA5O15131 536 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 NVLO15381 856 aaKnown RBP13.47□□□□□ -0.25
HDAC6-215ENST00000465457 YY2O15391 372 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 KLK8O60259 260 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 AP2A2O94973 939 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 S100BP04271 92 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-215ENST00000465457 OR56A5P0C7T3 313 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 JMJD7P0C870 316 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 ENO3P13929 434 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-215ENST00000465457 GFAPP14136 432 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 ARRB2P32121 409 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 MMP12P39900 470 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 IDH3AP50213 366 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 PGGT1BP53609 377 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 INHBCP55103 352 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 KCNAB2Q13303 367 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 EIF3IQ13347 325 aaKnown RBP13.47□□□□□ -0.25
HDAC6-215ENST00000465457 PTPRRQ15256 657 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 SPRED3Q2MJR0 410 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 SH2D4BQ5SQS7 431 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 ZNF678Q5SXM1 525 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 CRYBG3Q68DQ2 2970 aa13.47□□□□□ -0.25
HDAC6-215ENST00000465457 ASRGL1Q7L266 308 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms