RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 NPY2RP49146 381 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 VSX2P58304 361 aaPredicted RBP13.28□□□□□ -0.28
RPP40-203ENST00000464646 SRSF1Q07955 248 aaKnown RBP eCLIP13.28□□□□□ -0.28
RPP40-203ENST00000464646 CCNG2Q16589 344 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 EIF2S3LQ2VIR3 472 aaKnown RBP13.28□□□□□ -0.28
RPP40-203ENST00000464646 DCAF10Q5QP82 559 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 VWA5B1Q5TIE3 1220 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 ZNF385CQ66K41 422 aaPredicted RBP13.28□□□□□ -0.28
RPP40-203ENST00000464646 SLC6A19Q695T7 634 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 C4orf22Q6V702 233 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 ZADH2Q8N4Q0 377 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 RBMXL3Q8N7X1 1067 aaKnown RBP13.28□□□□□ -0.28
RPP40-203ENST00000464646 LINC01555Q8NAE3 123 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 OR2Y1Q8NGV0 311 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 OR2L8Q8NGY9 312 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 FLVCR1-AS1Q8TAF5 88 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 MAGEC3Q8TD91 643 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 SOX17Q9H6I2 414 aaPredicted RBP13.28□□□□□ -0.28
RPP40-203ENST00000464646 ATP13A2Q9NQ11 1180 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 CUTCQ9NTM9 273 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 SYBUQ9NX95 663 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 CRYL1Q9Y2S2 319 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 MAP4K5Q9Y4K4 846 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 MRFAP1Q9Y605 127 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 FAM169AQ9Y6X4 670 aa13.28□□□□□ -0.28
RPP40-203ENST00000464646 SETXQ7Z333 2677 aaKnown RBP13.27□□□□□ -0.28
RPP40-203ENST00000464646 PCM1Q15154 2024 aa13.27□□□□□ -0.28
RPP40-203ENST00000464646 A0A1B0GX78 115 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 KRT87PA6NCN2 255 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 NRDCO43847 1150 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 GPC4O75487 556 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 KLF7O75840 302 aaPredicted RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 CEACAM4O75871 244 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 CCDC175P0C221 793 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 PSMB5P28074 263 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 CXCR5P32302 372 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 SARNPP82979 210 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 ACVR1Q04771 509 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 ELOAQ14241 798 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 GRM7Q14831 915 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 RBBP7Q16576 425 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 TCTE1Q5JU00 501 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 MRNIPQ6NTE8 343 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 HPS6Q86YV9 775 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 PRSS58Q8IYP2 241 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 CISD2Q8N5K1 135 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 TM9SF4Q92544 642 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 PEX13Q92968 403 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 PNPLA2Q96AD5 504 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 MFSD3Q96ES6 412 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 ACAT2Q9BWD1 397 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 MLXIPLQ9NP71 852 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 EIF2B3Q9NR50 452 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 SAMD15Q9P1V8 674 aa13.27□□□□□ -0.29
RPP40-203ENST00000464646 ZC3H7BQ9UGR2 993 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 DRG1Q9Y295 367 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 MDC1Q14676 2089 aaKnown RBP13.27□□□□□ -0.29
RPP40-203ENST00000464646 CTAGE9A4FU28 777 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 DSCR3O14972 297 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 NIPSNAP2O75323 286 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 IPO13O94829 963 aaKnown RBP13.26□□□□□ -0.29
RPP40-203ENST00000464646 SORBS2O94875 1100 aaKnown RBP13.26□□□□□ -0.29
RPP40-203ENST00000464646 SLCO2B1O94956 709 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 C1orf105O95561 183 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 PAMP19021 973 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
RPP40-203ENST00000464646 OR1D4P47884 311 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 MYBPC3Q14896 1274 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 FAM214AQ32MH5 1076 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 CCSMST1Q4G0I0 132 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 C4orf17Q53FE4 359 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 WASHC2DQ5SRD0 308 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 PAPD7Q5XG87 772 aaKnown RBP13.26□□□□□ -0.29
RPP40-203ENST00000464646 FCRL6Q6DN72 434 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 LRRC6Q86X45 466 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 PARP9Q8IXQ6 854 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 IQCKQ8N0W5 287 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 UBE2Q2Q8WVN8 375 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 CNDP1Q96KN2 507 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 SMAD5Q99717 465 aaKnown RBP13.26□□□□□ -0.29
RPP40-203ENST00000464646 CHRNA10Q9GZZ6 450 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 CCDC68Q9H2F9 335 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 C5AR2Q9P296 337 aa13.26□□□□□ -0.29
RPP40-203ENST00000464646 ASH1LQ9NR48 2969 aaKnown RBP13.26□□□□□ -0.29
RPP40-203ENST00000464646 A1L4Q6 167 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 AGPSO00116 658 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 CNOT3O75175 753 aaKnown RBP13.25□□□□□ -0.29
RPP40-203ENST00000464646 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
RPP40-203ENST00000464646 CMPK1P30085 196 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 RPA3P35244 121 aaPredicted RBP13.25□□□□□ -0.29
RPP40-203ENST00000464646 CCNFP41002 786 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 OCA2Q04671 838 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 GPS1Q13098 491 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 THOC5Q13769 683 aaKnown RBP13.25□□□□□ -0.29
RPP40-203ENST00000464646 NR6A1Q15406 480 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 PLEKHN1Q494U1 663 aaPredicted RBP13.25□□□□□ -0.29
RPP40-203ENST00000464646 RNF187Q5TA31 235 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms