RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 OPRPNQ99935 248 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-205ENST00000464541 P4HTMQ9NXG6 502 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 BARHL2Q9NY43 387 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 CPSF3Q9UKF6 684 aaKnown RBP5.24□□□□□ -1.57
PTCD3-205ENST00000464541 STUB1Q9UNE7 303 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 MRPS28Q9Y2Q9 187 aaKnown RBP5.24□□□□□ -1.57
PTCD3-205ENST00000464541 PYGO1Q9Y3Y4 419 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 MSGN1A6NI15 193 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 ENO4A6NNW6 628 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 FIBPO43427 364 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 GLRA3O75311 464 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 SMIM18P0DKX4 95 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 PTGER4P35408 488 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 LHX1P48742 406 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 MAPK12P53778 367 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 SNRPD1P62314 119 aaKnown RBP5.23□□□□□ -1.57
PTCD3-205ENST00000464541 ZNF415Q09FC8 603 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 KYNUQ16719 465 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 CTU2Q2VPK5 515 aaKnown RBP5.23□□□□□ -1.57
PTCD3-205ENST00000464541 KRTAP27-1Q3LI81 207 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 XKR6Q5GH73 641 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 SLC35D3Q5M8T2 416 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 CST9LP1Q5W188 147 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 PLPPR4Q7Z2D5 763 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 NUP54Q7Z3B4 507 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 RTN4RL2Q86UN3 420 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 EID3Q8N140 333 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 NDUFAF2Q8N183 169 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 TDRD5Q8NAT2 981 aaKnown RBP5.23□□□□□ -1.57
PTCD3-205ENST00000464541 OR13C3Q8NGS6 347 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 SNRNP27Q8WVK2 155 aaKnown RBP5.23□□□□□ -1.57
PTCD3-205ENST00000464541 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 OR2B2Q9GZK3 357 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 FAM207AQ9NSI2 230 aaPredicted RBP5.23□□□□□ -1.57
PTCD3-205ENST00000464541 MAN1B1Q9UKM7 699 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 RPS6KL1Q9Y6S9 549 aa5.23□□□□□ -1.57
PTCD3-205ENST00000464541 UBE2CO00762 179 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 CLDN4O14493 209 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 TYMPP19971 482 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 EEF1DP29692 281 aaKnown RBP5.22□□□□□ -1.57
PTCD3-205ENST00000464541 NUCB1Q02818 461 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 TAF10Q12962 218 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 PHKG1Q16816 387 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 TCP11X2Q5H9J9 407 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 PWWP2BQ6NUJ5 590 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 FAAP20Q6NZ36 180 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 G2E3Q7L622 706 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 CCDC89Q8N998 374 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 KBTBD8Q8NFY9 601 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 FAM20AQ96MK3 541 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 MUS81Q96NY9 551 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 FEVQ99581 238 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 FUCA2Q9BTY2 467 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 TMX4Q9H1E5 349 aaPredicted RBP5.22□□□□□ -1.57
PTCD3-205ENST00000464541 RNF186Q9NXI6 227 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 OR6C2Q9NZP2 312 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 TMEM181Q9P2C4 612 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 CACNG5Q9UF02 275 aa5.22□□□□□ -1.57
PTCD3-205ENST00000464541 ARPC2O15144 300 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 ZNF821O75541 412 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 CDK2AP2O75956 126 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 ATP5BP06576 529 aaKnown RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 GP1BBP13224 206 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 IRF2P14316 349 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 JAK1P23458 1154 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 MC5RP33032 325 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 CSTF2P33240 577 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 RPL21P46778 160 aaKnown RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 LUMP51884 338 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 HILS1P60008 231 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 TMEM187Q14656 261 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 TNIP1Q15025 636 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 RASA2Q15283 850 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 MCMDC2Q4G0Z9 681 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 C14orf177Q52M58 125 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 KRT39Q6A163 491 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 RAB42Q8N4Z0 105 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 DBF4BQ8NFT6 615 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 ROBO4Q8WZ75 1007 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 THOC1Q96FV9 657 aaKnown RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 MAGED4Q96JG8 741 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 LINC00615Q96LM1 132 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 RABEP2Q9H5N1 569 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 CDH20Q9HBT6 801 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 CHST11Q9NPF2 352 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 PPANQ9NQ55 473 aaKnown RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 KLHL8Q9P2G9 620 aaPredicted RBP5.21□□□□□ -1.58
PTCD3-205ENST00000464541 RASAL2Q9UJF2 1139 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 SNED1Q8TER0 1413 aa5.21□□□□□ -1.58
PTCD3-205ENST00000464541 PLOD3O60568 738 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 TADA2AO75478 443 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 ZFAND5O76080 213 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 VTNP04004 478 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 FYNP06241 537 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 CENPBP07199 599 aaPredicted RBP5.2□□□□□ -1.58
PTCD3-205ENST00000464541 ZNF883P0CG24 379 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 EPCAMP16422 314 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 CPT2P23786 658 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 CCR10P46092 362 aa5.2□□□□□ -1.58
PTCD3-205ENST00000464541 IRX1P78414 480 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms