RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 RBM20Q5T481 1227 aaKnown RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 TEDDM1Q5T9Z0 273 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 TTC23LQ6PF05 361 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 DSELQ8IZU8 1212 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 CCDC68Q9H2F9 335 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ACTL8Q9H568 366 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ACTR5Q9H9F9 607 aaPredicted RBP12.49□□□□□ -0.41
XRN1-203ENST00000463916 PCDHGA6Q9Y5G7 932 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 ZNF462Q96JM2 2506 aa12.49□□□□□ -0.41
XRN1-203ENST00000463916 RAD51CO43502 376 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 NRP2O60462 931 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 CCNFP41002 786 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 CDKN2DP55273 166 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 CYP2A13Q16696 494 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 PTCHD3Q3KNS1 767 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 FCRL6Q6DN72 434 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 CPNE9Q8IYJ1 553 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 OR2A1Q8NGT9 310 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 HMGCLL1Q8TB92 370 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 ASB11Q8WXH4 323 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 INPP5DQ92835 1189 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 MR1Q95460 341 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 CLIP3Q96DZ5 547 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 MED8Q96G25 268 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 LRFN5Q96NI6 719 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 PPANQ9NQ55 473 aaKnown RBP12.48□□□□□ -0.41
XRN1-203ENST00000463916 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 KCND3Q9UK17 655 aa12.48□□□□□ -0.41
XRN1-203ENST00000463916 E7EQ34 232 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 CREG1O75629 220 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 OR2B3O76000 313 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 CAPN1P07384 714 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 ARL4CP56559 192 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 NFKB2Q00653 900 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 DEFB109BQ30KR1 87 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 STEAP4Q687X5 459 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 BORAQ6PGQ7 559 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 PIWIL4Q7Z3Z4 852 aaKnown RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 OR9A1PQ8NGU1 263 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 DLG3Q92796 817 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 SLC22A18Q96BI1 424 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 PKP4Q99569 1192 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 ARHGAP9Q9BRR9 750 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 ERP44Q9BS26 406 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 DPH5Q9H2P9 285 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 C21orf140B9A014 251 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 E7ESA3 106 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 GFYI3L273 518 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 MYO1CO00159 1063 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 SMAPO00193 183 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 ERGP11308 486 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 MCM3P25205 808 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 PTPN4P29074 926 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 PDIA2Q13087 525 aaKnown RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 TRADDQ15628 312 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 TTLL9Q3SXZ7 439 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 CRTC2Q53ET0 693 aaPredicted RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 ZNF385CQ66K41 422 aaPredicted RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 FIGLAQ6QHK4 219 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 SUSD1Q6UWL2 747 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 NEK10Q6ZWH5 1172 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 SYTL1Q8IYJ3 562 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 ZNF655Q8N720 491 aaPredicted RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 FBXO36Q8NEA4 188 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 OR2L3Q8NG85 312 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 MAGEC3Q8TD91 643 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 EEF1AKMT1Q8WVE0 214 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 N4BP2L2Q92802 583 aaPredicted RBP12.47□□□□□ -0.41
XRN1-203ENST00000463916 LRRC39Q96DD0 335 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 MIPEPQ99797 713 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 ACAT2Q9BWD1 397 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 RAB11FIP5Q9BXF6 653 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 EURLQ9NYK6 297 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 COMMD10Q9Y6G5 202 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 FER1L5A0AVI2 2057 aa12.47□□□□□ -0.41
XRN1-203ENST00000463916 COL6A6A6NMZ7 2263 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 CTSVO60911 334 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 PIAS1O75925 651 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 SLC16A8O95907 504 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 KLK3P07288 261 aaPredicted RBP12.46□□□□□ -0.41
XRN1-203ENST00000463916 PAQR3Q6TCH7 311 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 MCATQ8IVS2 390 aaKnown RBP12.46□□□□□ -0.41
XRN1-203ENST00000463916 GPR135Q8IZ08 494 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 PPFIBP2Q8ND30 876 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 CATSPER2Q96P56 530 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 GPR87Q9BY21 358 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 GRHL1Q9NZI5 618 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 DHCR7Q9UBM7 475 aaKnown RBP12.46□□□□□ -0.41
XRN1-203ENST00000463916 ADAMTS6Q9UKP5 1117 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 PLCL2Q9UPR0 1127 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 FARSAQ9Y285 508 aaKnown RBP12.46□□□□□ -0.41
XRN1-203ENST00000463916 MRFAP1Q9Y605 127 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 PSAT1Q9Y617 370 aa12.46□□□□□ -0.41
XRN1-203ENST00000463916 VPS26AO75436 327 aa12.46□□□□□ -0.42
XRN1-203ENST00000463916 CATP04040 527 aaKnown RBP12.46□□□□□ -0.42
XRN1-203ENST00000463916 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.42
XRN1-203ENST00000463916 CBSLP0DN79 551 aa12.46□□□□□ -0.42
XRN1-203ENST00000463916 CBSP35520 551 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms