RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 APOEP02649 317 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 KRT7P08729 469 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 NHLRC4P0CG21 123 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ACADMP11310 421 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 DRD4P21917 467 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PCSK6P29122 969 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 EPHA8P29322 1005 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 HLA-FP30511 346 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CSKP41240 450 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CCR10P46092 362 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RGRP47804 291 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CLCN2P51788 898 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TERF1P54274 439 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 C21orf59P57076 290 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TPI1P60174 286 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RPS14P62263 151 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 COG7P83436 770 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ARF5P84085 180 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZBTB17Q13105 803 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 OLIG2Q13516 323 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PGS1Q32NB8 556 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 BOLA3Q53S33 107 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 UBAP2Q5T6F2 1119 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 KIAA1614Q5VZ46 1190 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 NUGGCQ68CJ6 796 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 UNC45BQ8IWX7 931 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RCOR2Q8IZ40 523 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PGBD5Q8N414 524 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RTL3Q8N8U3 475 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ATP6V0D2Q8N8Y2 350 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ACTRT1Q8TDG2 376 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 UCMAQ8WVF2 138 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SORCS1Q8WY21 1168 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 GRAMD1AQ96CP6 724 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TBC1D31Q96DN5 1066 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 HSPBAP1Q96EW2 488 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 HMCESQ96FZ2 354 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 NAF1Q96HR8 494 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF778Q96MU6 729 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RPRD1AQ96P16 312 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 OLFM3Q96PB7 478 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TEP1Q99973 2627 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZNF670Q9BS34 389 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TRIM51Q9BSJ1 452 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SLC2A11Q9BYW1 496 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 DCLK3Q9C098 648 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 BTBD1Q9H0C5 482 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 BRD8Q9H0E9 1235 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 LRRC19Q9H756 370 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 POLR1BQ9H9Y6 1135 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RRN3Q9NYV6 651 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SERGEFQ9UGK8 458 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SERTAD3Q9UJW9 196 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 OR51B4Q9Y5P0 310 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 USP9YO00507 2555 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 KIAA1549LQ6ZVL6 1849 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 LRRK2Q5S007 2527 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 DOPEY2Q9Y3R5 2298 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 MUC22E2RYF6 1773 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ANKRD17O75179 2603 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CDRT15L2A8MXV6 281 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 F5H5T6 163 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 KCNK1O00180 336 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TLR4O00206 839 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PGRMC1O00264 195 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TRIM38O00635 465 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 APOL1O14791 398 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TP73O15350 636 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RAD51CO43502 376 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SMAD6O43541 496 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 LIASO43766 372 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZMPSTE24O75844 475 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 LUC7L3O95232 432 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SFTPCP11686 197 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PRLRP16471 622 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TCP1P17987 556 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 RBL1P28749 1068 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 LIPAP38571 399 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ARRB1P49407 418 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 HARS2P49590 506 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 STK19P49842 368 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PAPOLAP51003 745 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CCR5P51681 352 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 WASHC5Q12768 1159 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 BMPR2Q13873 1038 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 PAFAH1B3Q15102 231 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TRIP13Q15645 432 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 OASLQ15646 514 aaKnown RBP3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TFDP3Q5H9I0 405 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SEL1L2Q5TEA6 688 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 THEMIS2Q5TEJ8 643 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 FAXCQ5TGI0 409 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 LINGO4Q6UY18 593 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 MAVSQ7Z434 540 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 ZBTB46Q86UZ6 589 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 KLHL7Q8IXQ5 586 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 TXLNBQ8N3L3 684 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 SLC25A45Q8N413 288 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 CPXM2Q8N436 756 aa3.6□□□□□ -1.83
SCFD1-204ENST00000463622 FAM109AQ8N4B1 249 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms