RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 FRMD7Q6ZUT3 714 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 RPS27LQ71UM5 84 aaKnown RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 RAB44Q7Z6P3 723 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 AMIGO1Q86WK6 493 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 TRIM48Q8IWZ4 208 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 TRIM42Q8IWZ5 723 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 ADGRF3Q8IZF5 1079 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 PPFIBP2Q8ND30 876 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 SETD7Q8WTS6 366 aaKnown RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 LCN9Q8WX39 176 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 PYCR2Q96C36 320 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 CNDP1Q96KN2 507 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 OR4K3Q96R72 315 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 RAB11FIP5Q9BXF6 653 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 DRC3Q9H069 523 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 ZNF395Q9H8N7 513 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 RXFP3Q9NSD7 469 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 WWOXQ9NZC7 414 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 OR6C2Q9NZP2 312 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 LNPEPQ9UIQ6 1025 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 ADAM21Q9UKJ8 722 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 FAM221BA6H8Z2 402 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 BTN3A3O00478 584 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 PPP6CO00743 305 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 UBFD1O14562 309 aaKnown RBP13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SIGLEC6O43699 453 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 KDM1AO60341 852 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 PRAMEF4O60810 478 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SUPT7LO94864 414 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 ALPPL2P10696 532 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 CDH13P55290 713 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 OCRLQ01968 901 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 STX3Q13277 289 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 E2F2Q14209 437 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 RCN2Q14257 317 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 PRAMEF9Q5VWM5 478 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 TTC19Q6DKK2 380 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-202ENST00000463060 LRRC70Q7Z2Q7 622 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 GOLGA7Q7Z5G4 137 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SYTL1Q8IYJ3 562 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 CCNYL1Q8N7R7 359 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 OR4E2Q8NGC2 313 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 FLVCR1-AS1Q8TAF5 88 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 DYDC1Q8WWB3 177 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 JPH3Q8WXH2 748 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SMPDL3AQ92484 453 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SH3KBP1Q96B97 665 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 APOLD1Q96LR9 279 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 ZNF317Q96PQ6 595 aaPredicted RBP13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SORT1Q99523 831 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 TRMOQ9BU70 441 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 OPTCQ9UBM4 332 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 HAO1Q9UJM8 370 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 ZNF225Q9UK10 706 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 PADI4Q9UM07 663 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 SLC22A14Q9Y267 594 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 RNF215Q9Y6U7 377 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 PCM1Q15154 2024 aa13.88□□□□□ -0.19
COL6A1-202ENST00000463060 A0A1B0GTL3 188 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 PABPN1LA6NDY0 278 aaKnown RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 ZNF839A8K0R7 811 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 TMEM114B3SHH9 223 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 OR7A17O14581 309 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 CCNT2O60583 730 aaKnown RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 CD59P13987 128 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 PNLIPP16233 465 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 GLB1P16278 677 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 CCND1P24385 295 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 PEBP1P30086 187 aaKnown RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 CCR10P46092 362 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 SLC1A6P48664 564 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 ABCE1P61221 599 aaKnown RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 TBPL1P62380 186 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 CLCQ05315 142 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 GTF2H2Q13888 395 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 ARL13AQ5H913 290 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 ATG16L1Q676U5 607 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 GTF2H2CQ6P1K8 395 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 SUSD1Q6UWL2 747 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 LCTLQ6UWM7 567 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 C2orf73Q8N5S3 287 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 EID2Q8N6I1 236 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 TEX9Q8N6V9 391 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 OR2A1Q8NGT9 310 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 SREK1Q8WXA9 508 aaKnown RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 TBC1D10AQ9BXI6 508 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.87□□□□□ -0.19
COL6A1-202ENST00000463060 DNAJC11Q9NVH1 559 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 THAP1Q9NVV9 213 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 SPHK1Q9NYA1 384 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 LRIT1Q9P2V4 623 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 BTBD3Q9Y2F9 522 aa13.87□□□□□ -0.19
COL6A1-202ENST00000463060 GOLGA4Q13439 2230 aaKnown RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 EME2A4GXA9 379 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 SHOX2O60902 331 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 WDR47O94967 919 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms