RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PKP4	Q99569	1192 aa		9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	OLFM1	Q99784	485 aa		9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	ZPBP	Q9BS86	351 aa		9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	ACAT2	Q9BWD1	397 aa		9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	SLC7A5P2	Q9GIP4	190 aa		9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	KLHL42	Q9P2K6	505 aa		9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	CORO1C	Q9ULV4	474 aa	Predicted RBP	9.28	□□□□□ -0.92
PSMD4-208	ENST00000462970	SPAG6	O75602	509 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SCRG1	O75711	98 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	FAM155B	O75949	473 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	TIAF1	O95411	115 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	ACSL3	O95573	720 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	NTRK1	P04629	796 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	FGF5	P12034	268 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	ZNF28	P17035	718 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	MAG	P20916	626 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	FDXR	P22570	491 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	OAS2	P29728	719 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	GRIA3	P42263	894 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	PNLIPRP1	P54315	467 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	TMPRSS3	P57727	454 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	TAS2R39	P59534	338 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	TIAL1	Q01085	375 aa	Known RBP eCLIP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	FASTK	Q14296	549 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	USP10	Q14694	798 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SLMAP	Q14BN4	828 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SLC5A12	Q1EHB4	618 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	KBTBD12	Q3ZCT8	623 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	LRRC8E	Q6NSJ5	796 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	PWWP2B	Q6NUJ5	590 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	C6orf15	Q6UXA7	325 aa	Predicted RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CCDC81	Q6ZN84	652 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	MBOAT1	Q6ZNC8	495 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CDHR3	Q6ZTQ4	885 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	GALNT7	Q86SF2	657 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	IFT20	Q8IY31	132 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	NLGN4X	Q8N0W4	816 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CARF	Q8N187	725 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	LRRN4CL	Q8ND94	238 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	UHMK1	Q8TAS1	419 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	MCOLN3	Q8TDD5	553 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	DENND1A	Q8TEH3	1009 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	ASB11	Q8WXH4	323 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SMPDL3A	Q92484	453 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	NKD1	Q969G9	470 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	KIAA1143	Q96AT1	154 aa	Predicted RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	MED8	Q96G25	268 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	TCTN2	Q96GX1	697 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CCNL2	Q96S94	520 aa	Predicted RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	FMO2	Q99518	471 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CPNE1	Q99829	537 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	TRIM54	Q9BYV2	358 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	PITPNM3	Q9BZ71	974 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	UNK	Q9C0B0	810 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	PHACTR1	Q9C0D0	580 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	B3GNT4	Q9C0J1	378 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	RHOJ	Q9H4E5	214 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CAB39L	Q9H9S4	337 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	GPN2	Q9H9Y4	310 aa	Predicted RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	LRRC4C	Q9HCJ2	640 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	INTS7	Q9NVH2	962 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	NINJ2	Q9NZG7	142 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SPATA7	Q9P0W8	599 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SERTAD3	Q9UJW9	196 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	ADAMTS6	Q9UKP5	1117 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	NFU1	Q9UMS0	254 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	BTRC	Q9Y297	605 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	MTO1	Q9Y2Z2	717 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	MDC1	Q14676	2089 aa	Known RBP	9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	CFAP47	Q6ZTR5	3102 aa		9.27	□□□□□ -0.93
PSMD4-208	ENST00000462970	SEC16A	O15027	2179 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	NPEPPSL1	A6NEC2	478 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	FAM159B	A6NKW6	160 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	ZNF839	A8K0R7	811 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	MYO1C	O00159	1063 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	EIF3F	O00303	357 aa	Predicted RBP	9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	PHGDH	O43175	533 aa	Known RBP	9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	KATNA1	O75449	491 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	SLC16A8	O95907	504 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	C8G	P07360	202 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	CCNYL3	P0C7X3	344 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	HIST1H2AD	P20671	130 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	CMPK1	P30085	196 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	PHB	P35232	272 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	GP5	P40197	560 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	UCN	P55089	124 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	ITGA1	P56199	1179 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	ZIC1	Q15915	447 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	CYP2A13	Q16696	494 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	PRAMEF17	Q5VTA0	474 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	KIAA1614	Q5VZ46	1190 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	FIGLA	Q6QHK4	219 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	CYHR1	Q6ZMK1	362 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	TIPARP	Q7Z3E1	657 aa	Known RBP	9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	ADCK2	Q7Z695	626 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	GPR135	Q8IZ08	494 aa		9.26	□□□□□ -0.93
PSMD4-208	ENST00000462970	OR8K5	Q8NH50	307 aa		9.26	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms