RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 INTS7Q9NVH2 962 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 TRMT6Q9UJA5 497 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 TUBD1Q9UJT1 453 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 SERTAD3Q9UJW9 196 aa14.84□□□□□ -0.03
VARS-219ENST00000461328 GCN1Q92616 2671 aaKnown RBP14.84□□□□□ -0.03
VARS-219ENST00000461328 KRT87PA6NCN2 255 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 J3QKU1 62 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 RAD51CO43502 376 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 ITGA1P56199 1179 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 NFKB2Q00653 900 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 TSTA3Q13630 321 aaPredicted RBP14.83□□□□□ -0.04
VARS-219ENST00000461328 GRB7Q14451 532 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 GBX1Q14549 363 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 SF1Q15637 639 aaKnown RBP14.83□□□□□ -0.04
VARS-219ENST00000461328 CCSMST1Q4G0I0 132 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 UGT3A1Q6NUS8 523 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 FAM20CQ8IXL6 584 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 CPNE9Q8IYJ1 553 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 GPR135Q8IZ08 494 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 LINC01555Q8NAE3 123 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 GIMAP7Q8NHV1 300 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 RUFY1Q96T51 708 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 SLC30A3Q99726 388 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 ACTR5Q9H9F9 607 aaPredicted RBP14.83□□□□□ -0.04
VARS-219ENST00000461328 SPATA7Q9P0W8 599 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 SLC17A6Q9P2U8 582 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 POLHQ9Y253 713 aa14.83□□□□□ -0.04
VARS-219ENST00000461328 ARHGEF33A8MVX0 844 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 E7EQ34 232 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 MEN1O00255 615 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 MATN4O95460 622 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 SYF2O95926 243 aaKnown RBP14.82□□□□□ -0.04
VARS-219ENST00000461328 RECKO95980 971 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 FURINP09958 794 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 ENO3P13929 434 aaPredicted RBP14.82□□□□□ -0.04
VARS-219ENST00000461328 MAGP20916 626 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 PTPN4P29074 926 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 RPS18P62269 152 aaKnown RBP14.82□□□□□ -0.04
VARS-219ENST00000461328 ZIC1Q15915 447 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 KIAA0408Q6ZU52 694 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 NEK10Q6ZWH5 1172 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 GPATCH11Q8N954 259 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 SLC38A9Q8NBW4 561 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 FBXO36Q8NEA4 188 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 FLVCR1-AS1Q8TAF5 88 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 C9orf43Q8TAL5 461 aaPredicted RBP14.82□□□□□ -0.04
VARS-219ENST00000461328 CD200R1Q8TD46 325 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 SEC14L1Q92503 715 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 ZNF592Q92610 1267 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 INPP5DQ92835 1189 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 LRFN5Q96NI6 719 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 WDR83Q9BRX9 315 aaKnown RBP14.82□□□□□ -0.04
VARS-219ENST00000461328 ERP44Q9BS26 406 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 MENTQ9BUN1 341 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 RAB17Q9H0T7 212 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 CHST8Q9H2A9 424 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 TAS2R13Q9NYV9 303 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 KLHL42Q9P2K6 505 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 KLHL20Q9Y2M5 609 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 DHRS7Q9Y394 339 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 UTP11Q9Y3A2 253 aaKnown RBP14.82□□□□□ -0.04
VARS-219ENST00000461328 TEX264Q9Y6I9 313 aa14.82□□□□□ -0.04
VARS-219ENST00000461328 OR2B3O76000 313 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 URI1O94763 535 aaPredicted RBP14.81□□□□□ -0.04
VARS-219ENST00000461328 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 MCM3P25205 808 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 RGS4P49798 205 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 FASTKD3Q14CZ7 662 aaKnown RBP14.81□□□□□ -0.04
VARS-219ENST00000461328 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.81□□□□□ -0.04
VARS-219ENST00000461328 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 TRMT10BQ6PF06 316 aaKnown RBP14.81□□□□□ -0.04
VARS-219ENST00000461328 CAPN12Q6ZSI9 719 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 SYVN1Q86TM6 617 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 CNTN4Q8IWV2 1026 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 ZBED8Q8IZ13 594 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 DSELQ8IZU8 1212 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 OR9A1PQ8NGU1 263 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 FAM60AQ9NP50 221 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 PCMTD2Q9NV79 361 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 WHRNQ9P202 907 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 ZFATQ9P243 1243 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 FARSAQ9Y285 508 aaKnown RBP14.81□□□□□ -0.04
VARS-219ENST00000461328 MAN2B2Q9Y2E5 1009 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 MED16Q9Y2X0 877 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 KCNMB2Q9Y691 235 aa14.81□□□□□ -0.04
VARS-219ENST00000461328 BOD1L1Q8NFC6 3051 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 ZNF839A8K0R7 811 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 ZNF749O43361 778 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 PSIP1O75475 530 aaKnown RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 HBQ1P09105 142 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 MPC1LP0DKB6 136 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 CBSLP0DN79 551 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 PSMB5P28074 263 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 RPA3P35244 121 aaPredicted RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 RORAP35398 523 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 CBSP35520 551 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 PDAP1Q13442 181 aaKnown RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 PTCHD3Q3KNS1 767 aa14.8□□□□□ -0.04
VARS-219ENST00000461328 RBM20Q5T481 1227 aaKnown RBP14.8□□□□□ -0.04
VARS-219ENST00000461328 TEDDM1Q5T9Z0 273 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms