RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 CASP8Q14790 479 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 OR4D1Q15615 310 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 CLPPQ16740 277 aaPredicted RBP13.35□□□□□ -0.27
CHRD-209ENST00000461120 FAM83EQ2M2I3 478 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 KRT71Q3SY84 523 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 CLEC14AQ86T13 490 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 OOSP2Q86WS3 158 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 ADGRF3Q8IZF5 1079 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 PLD6Q8N2A8 252 aaKnown RBP13.35□□□□□ -0.27
CHRD-209ENST00000461120 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 LINC01555Q8NAE3 123 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 OR2L8Q8NGY9 312 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 DENND1AQ8TEH3 1009 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 NCSTNQ92542 709 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 KIAA1191Q96A73 305 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 GPR78Q96P69 363 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 NUDT22Q9BRQ3 303 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 RAB11FIP5Q9BXF6 653 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 TRIM54Q9BYV2 358 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 RDH14Q9HBH5 336 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 PCMTD2Q9NV79 361 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 HRASLS2Q9NWW9 162 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 OR6C2Q9NZP2 312 aa13.35□□□□□ -0.27
CHRD-209ENST00000461120 UNC13CQ8NB66 2214 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 GOLGA8RI6L899 631 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 SLC16A8O95907 504 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CHRM5P08912 532 aaPredicted RBP13.34□□□□□ -0.27
CHRD-209ENST00000461120 HIST1H2AGP0C0S8 130 aaPredicted RBP13.34□□□□□ -0.27
CHRD-209ENST00000461120 PYGBP11216 843 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ERGP11308 486 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 HIST1H2ADP20671 130 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 HSD17B2P37059 387 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CLDN6P56747 220 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CYP4F3Q08477 520 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ARHGAP19Q14CB8 494 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CYP2A13Q16696 494 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CEP85LQ5SZL2 805 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ANKS6Q68DC2 871 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 TMEM71Q6P5X7 295 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 WDR74Q6RFH5 385 aaPredicted RBP13.34□□□□□ -0.27
CHRD-209ENST00000461120 MBOAT1Q6ZNC8 495 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 SH2D5Q6ZV89 423 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 TMPRSS9Q7Z410 1059 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 RAB42Q8N4Z0 105 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 HMGCLL1Q8TB92 370 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ZNF480Q8WV37 535 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 HIST1H2AHQ96KK5 128 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 CCDC138Q96M89 665 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 HIST1H2AJQ99878 128 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 DPYSL5Q9BPU6 564 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 H2AFJQ9BTM1 129 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 TWSG1Q9GZX9 223 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 RAB33BQ9H082 229 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ZMYND15Q9H091 742 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 PRORYQ9H606 182 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ALG9Q9H6U8 611 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ZNF358Q9NW07 568 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 ARL15Q9NXU5 204 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 EPHA6Q9UF33 1036 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 LNPEPQ9UIQ6 1025 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 OARD1Q9Y530 152 aa13.34□□□□□ -0.27
CHRD-209ENST00000461120 MN1Q10571 1320 aaPredicted RBP13.34□□□□□ -0.27
CHRD-209ENST00000461120 COL27A1Q8IZC6 1860 aaPredicted RBP13.33□□□□□ -0.27
CHRD-209ENST00000461120 CCDC189A1A4V9 331 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 PABPN1LA6NDY0 278 aaKnown RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 MT-CO3P00414 261 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 C9P02748 559 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 IMPA1P29218 277 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 PEBP1P30086 187 aaKnown RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 GLRBP48167 497 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 KCNC1P48547 511 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 PNLIPRP1P54315 467 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 GFERP55789 205 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 PPP1CAP62136 330 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 CDKL1Q00532 357 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 PRKAA1Q13131 559 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 FASTKQ14296 549 aaKnown RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 ACAP2Q15057 778 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 TSNAXIP1Q2TAA8 658 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 HES3Q5TGS1 186 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 ARMC6Q6NXE6 501 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 IRGCQ6NXR0 463 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 KLC3Q6P597 504 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 ZNF574Q6ZN55 896 aaPredicted RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 RBM44Q6ZP01 1051 aaKnown RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 FRA10AC1Q70Z53 315 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 CROCCP2Q86T23 111 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 GPSM1Q86YR5 675 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 PLXDC1Q8IUK5 500 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 SLITRK4Q8IW52 837 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 C2orf73Q8N5S3 287 aaPredicted RBP13.33□□□□□ -0.28
CHRD-209ENST00000461120 OR4D9Q8NGE8 314 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 STAG3L4Q8TBR4 150 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 TSNARE1Q96NA8 513 aa13.33□□□□□ -0.28
CHRD-209ENST00000461120 ATOH8Q96SQ7 321 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms