RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 NTMT1Q9BV86 223 aa16.32■□□□□ 0.2
NELFCD-201ENST00000460601 SAR1AQ9NR31 198 aa16.32■□□□□ 0.2
NELFCD-201ENST00000460601 PRR5-ARHGAP8B1AHC4 643 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 HGFP14210 728 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 PSMB5P28074 263 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 NAA20P61599 178 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 LRP8Q14114 963 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 PTK2BQ14289 1009 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 GALNTL6Q49A17 601 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 METTL2BQ6P1Q9 378 aaKnown RBP16.31■□□□□ 0.2
NELFCD-201ENST00000460601 ACAD11Q709F0 780 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 PARGQ86W56 976 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 TBC1D21Q8IYX1 336 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 TMEM105Q8N8V8 129 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 LINC01555Q8NAE3 123 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 POLG2Q9UHN1 485 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 WDR87Q6ZQQ6 2873 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 TDGF1P13385 188 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 NUDT1P36639 197 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 HALP42357 657 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 CSNK1EP49674 416 aaKnown RBP16.31■□□□□ 0.2
NELFCD-201ENST00000460601 RACK1P63244 317 aaKnown RBP16.31■□□□□ 0.2
NELFCD-201ENST00000460601 CDC16Q13042 620 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 CHIT1Q13231 466 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 SGO1Q5FBB7 561 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 PRRT3Q5FWE3 981 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 CATSPEREQ5SY80 951 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 TTC23LQ6PF05 361 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 IL27RAQ6UWB1 636 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 MAMSTRQ6ZN01 415 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 RNF175Q8N4F7 328 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 MAGEC3Q8TD91 643 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 AKTIPQ9H8T0 292 aa16.31■□□□□ 0.2
NELFCD-201ENST00000460601 PRMT8Q9NR22 394 aaPredicted RBP16.31■□□□□ 0.2
NELFCD-201ENST00000460601 TRNAU1APQ9NX07 287 aaKnown RBP16.31■□□□□ 0.2
NELFCD-201ENST00000460601 ZNF624Q9P2J8 865 aaPredicted RBP16.31■□□□□ 0.2
NELFCD-201ENST00000460601 THADAQ6YHU6 1953 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 A6NCN8 305 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TOR1BO14657 336 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CLDN9O95484 217 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TNFP01375 233 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 EBLN1P0CF75 366 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 NPPBP16860 134 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 VARSP26640 1264 aaKnown RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 NEK2P51955 445 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 ILF3Q12906 894 aaKnown RBP eCLIP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 KRT33BQ14525 404 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TJAP1Q5JTD0 557 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 ADNP2Q6IQ32 1131 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 LARP4Q71RC2 724 aaKnown RBP eCLIP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 PHACTR4Q8IZ21 702 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 MFSD2AQ8NA29 543 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 IER2Q9BTL4 223 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 LRRC61Q9BV99 259 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CCDC106Q9BWC9 280 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 ARL8BQ9NVJ2 186 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TMEM221A6NGB7 291 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 M0R296 226 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CLGNO14967 610 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 LAMTOR5O43504 91 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 KCNJ13O60928 360 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 WFS1O76024 890 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 RPN2P04844 631 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 T-ENOLP0DO92 83 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 MTHFD1P11586 935 aaKnown RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 HMOX2P30519 316 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CSTF1Q05048 431 aaKnown RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 XKR6Q5GH73 641 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 THEMIS2Q5TEJ8 643 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CAPN13Q6MZZ7 669 aaPredicted RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 SLC36A4Q6YBV0 504 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TMPRSS11BQ86T26 416 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 OR52E1Q8NGJ3 308 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TUBGCP3Q96CW5 907 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 SLC45A3Q96JT2 553 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CAMK1GQ96NX5 476 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 SGPP1Q9BX95 441 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 CCDC177Q9NQR7 707 aaPredicted RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 APOBEC3BQ9UH17 382 aaKnown RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 TRIM33Q9UPN9 1127 aa16.3■□□□□ 0.2
NELFCD-201ENST00000460601 RRP15Q9Y3B9 282 aaKnown RBP16.3■□□□□ 0.2
NELFCD-201ENST00000460601 KCNE1BA0A087WTH5 132 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 CAPN14A8MX76 684 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 TLR4O00206 839 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 PEX11AO75192 247 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 ALDOCP09972 364 aaKnown RBP16.29■□□□□ 0.2
NELFCD-201ENST00000460601 JUNDP17535 347 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 ABRAXAS1Q6UWZ7 409 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 Q6ZSR9 355 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 C1orf210Q8IVY1 113 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 CEP70Q8NHQ1 597 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 GPBAR1Q8TDU6 330 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 PCED1AQ9H1Q7 454 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 TAAR2Q9P1P5 351 aa16.29■□□□□ 0.2
NELFCD-201ENST00000460601 CCDC22O60826 627 aa16.28■□□□□ 0.2
NELFCD-201ENST00000460601 CHEK2O96017 543 aa16.28■□□□□ 0.2
NELFCD-201ENST00000460601 ERGP11308 486 aa16.28■□□□□ 0.2
NELFCD-201ENST00000460601 F3P13726 295 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms