RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 ARRDC2Q8TBH0 407 aa11.43□□□□□ -0.58
CPSF3-202ENST00000460593 MAP6Q96JE9 813 aa11.43□□□□□ -0.58
CPSF3-202ENST00000460593 SNX18Q96RF0 628 aa11.43□□□□□ -0.58
CPSF3-202ENST00000460593 DERL2Q9GZP9 239 aa11.43□□□□□ -0.58
CPSF3-202ENST00000460593 HEBP1Q9NRV9 189 aa11.43□□□□□ -0.58
CPSF3-202ENST00000460593 KLHL20Q9Y2M5 609 aa11.43□□□□□ -0.58
CPSF3-202ENST00000460593 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GABRDO14764 452 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 IRAK2O43187 625 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 KIAA0513O60268 411 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 SCELO95171 688 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 FKBP9O95302 570 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 AQP1P29972 269 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 AKT1P31749 480 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 HSPA7P48741 367 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ZNF45Q02386 682 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GRIK2Q13002 908 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ARMCX4Q5H9R4 360 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 KDM4DQ6B0I6 523 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 OR2T5Q6IEZ7 315 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 PSAPL1Q6NUJ1 521 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 EFL1Q7Z2Z2 1120 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GLCCI1Q86VQ1 547 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 RTL3Q8N8U3 475 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 OR4K2Q8NGD2 314 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 OR2T29Q8NH02 315 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 LPPQ93052 612 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 RERGLQ9H628 205 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 C1orf109Q9NX04 203 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 MIOSQ9NXC5 875 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TOR4AQ9NXH8 423 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 NDRG4Q9ULP0 352 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 C12orf71A8MTZ7 269 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ARHGAP33O14559 1287 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 OR7A17O14581 309 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 NDUFS3O75489 264 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 RPP40O75818 363 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TSPAN12O95859 305 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 HMBSP08397 361 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 COL6A1P12109 1028 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TNFRSF1BP20333 461 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ZXDBP98169 803 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 IL18R1Q13478 541 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GPR50Q13585 617 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 VGLL4Q14135 290 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 MFSD10Q14728 455 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 RUNDC3AQ59EK9 446 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 PIK3R6Q5UE93 754 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 KIAA1614Q5VZ46 1190 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TIGD7Q6NT04 549 aaPredicted RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GOLGA7Q7Z5G4 137 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 HORMAD1Q86X24 394 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 OR5H6Q8NGV6 325 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ZNF675Q8TD23 568 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GPR151Q8TDV0 419 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 DNAJB3Q8WWF6 145 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 CDKN2AIPNLQ96HQ2 116 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TPD52L3Q96J77 140 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 OR5M11Q96RB7 305 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 COQ7Q99807 217 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 EXOSC4Q9NPD3 245 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 IPPQ9Y573 584 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 FNDC1Q4ZHG4 1894 aaPredicted RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 MEIOCA2RUB1 952 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 LCHNA4D1U4 455 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 AKR7A2O43488 359 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 SEC22BO75396 215 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 RPLP0P05388 317 aaKnown RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 CHRM5P08912 532 aaPredicted RBP11.42□□□□□ -0.58
CPSF3-202ENST00000460593 CYP2A7P20853 494 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ACVRL1P37023 503 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 SUOXP51687 545 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 CASP9P55211 416 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 HOXC5Q00444 222 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 PRKCDQ05655 676 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 SMARCB1Q12824 385 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 DDR2Q16832 855 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 ARMC4Q5T2S8 1044 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 DOK6Q6PKX4 331 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 SLC46A3Q7Z3Q1 461 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 LIMS2Q7Z4I7 341 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 C11orf74Q86VG3 221 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TOP6BLQ8N6T0 577 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GGHQ92820 318 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 NMUR1Q9HB89 426 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 TMEM184CQ9NVA4 438 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GPRC5BQ9NZH0 403 aa11.42□□□□□ -0.58
CPSF3-202ENST00000460593 GPR32O75388 356 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 NPPAP01160 153 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 POLR2EP19388 210 aaKnown RBP11.41□□□□□ -0.58
CPSF3-202ENST00000460593 TNFSF8P32971 234 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 PNPLA4P41247 253 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 PIK3CBP42338 1070 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 ZNF135P52742 658 aaPredicted RBP11.41□□□□□ -0.58
CPSF3-202ENST00000460593 TUBA1BP68363 451 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 NPRL3Q12980 569 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 RFX4Q33E94 735 aa11.41□□□□□ -0.58
CPSF3-202ENST00000460593 SYCE2Q6PIF2 218 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms