RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 RAD9AQ99638 391 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 EGFL8Q99944 293 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 PSD2Q9BQI7 771 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 KATNB1Q9BVA0 655 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 S1PR5Q9H228 398 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 UPF2Q9HAU5 1272 aaKnown RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 CDH20Q9HBT6 801 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ZNF334Q9HCZ1 680 aaPredicted RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 PFDN4Q9NQP4 134 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 SDR39U1Q9NRG7 319 aaPredicted RBP3.11□□□□□ -1.91
RFC4-211ENST00000460408 SPHK1Q9NYA1 384 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ZDHHC2Q9UIJ5 367 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 WDR83OSQ9Y284 106 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 TSPOAP1O95153 1857 aa3.11□□□□□ -1.91
RFC4-211ENST00000460408 ZCCHC6Q5VYS8 1495 aaKnown RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 DIP2BQ9P265 1576 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 IGLV9-49A0A0B4J1Y8 123 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 LOC101059948A0A1B0GTJ6 334 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 IGLV2-11P01706 119 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 ZFYP08048 801 aaPredicted RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 GNAZP19086 355 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 EFNA1P20827 205 aaPredicted RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 JAK1P23458 1154 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 HOXC13P31276 330 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 MNDAP41218 407 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 GMPSP49915 693 aaPredicted RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 CDH11P55287 796 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 BFSP1Q12934 665 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 UGP2Q16851 508 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 MCMDC2Q4G0Z9 681 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 TCTE1Q5JU00 501 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 MPP7Q5T2T1 576 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 C11orf63Q6NUN7 778 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 SLC27A1Q6PCB7 646 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 MEX3BQ6ZN04 569 aaKnown RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 MFSD6Q6ZSS7 791 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 IL17RELQ6ZVW7 336 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 SPATA19Q7Z5L4 167 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 DNAJB7Q7Z6W7 309 aaPredicted RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 FAM219AQ8IW50 185 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 MMD2Q8IY49 270 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 VANGL1Q8TAA9 524 aaPredicted RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 SETD6Q8TBK2 473 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 DEPDC1BQ8WUY9 529 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 PHLDA1Q8WV24 401 aaPredicted RBP3.1□□□□□ -1.91
RFC4-211ENST00000460408 FAM162AQ96A26 154 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 ZNF354BQ96LW1 612 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 FAM20AQ96MK3 541 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 SLC2A11Q9BYW1 496 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 FAM118AQ9NWS6 357 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 TBC1D7Q9P0N9 293 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 POLLQ9UGP5 575 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 TMED3Q9Y3Q3 217 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 SCN5AQ14524 2016 aa3.1□□□□□ -1.91
RFC4-211ENST00000460408 MAPKBP1O60336 1514 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 TRAV34A0A0B4J273 112 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 HTR3EA5X5Y0 456 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 CASTOR2A6NHX0 329 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 DNM1LO00429 736 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 LMX1BO60663 402 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 PRKRAO75569 313 aaKnown RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 SLC22A3O75751 556 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 ATP6AP2O75787 350 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 NADKO95544 446 aaPredicted RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 GBAP04062 536 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 UMODP07911 640 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 FAM58BPP0C7Q3 252 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 PLA2G4BP0C869 781 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 IGHV4-31P0DP07 118 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 PDGFRAP16234 1089 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 PSMA3P25788 255 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 TLX1P31314 330 aaPredicted RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 ALDH3A2P51648 485 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 DLK1P80370 383 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 TAF10Q12962 218 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 TUBB2AQ13885 445 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 VEZF1Q14119 521 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 ODF4Q2M2E3 257 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 LBHQ53QV2 105 aaPredicted RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 XKR3Q5GH77 459 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 CYP4A22Q5TCH4 519 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 STPG1Q5TH74 334 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 SUSD4Q5VX71 490 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 RBMS3Q6XE24 437 aaKnown RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 C11orf57Q6ZUT1 292 aaPredicted RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 TRPT1Q86TN4 253 aaKnown RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 ISCA2Q86U28 154 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 OR8H3Q8N146 312 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 LMNTD1Q8N9Z9 388 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 ZNF383Q8NA42 475 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 TRIM58Q8NG06 486 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 OR52N5Q8NH56 324 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 C9orf43Q8TAL5 461 aaPredicted RBP3.09□□□□□ -1.91
RFC4-211ENST00000460408 PIGBQ92521 554 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 TM9SF4Q92544 642 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 MR1Q95460 341 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 ZNF524Q96C55 264 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 STAMBPL1Q96FJ0 436 aa3.09□□□□□ -1.91
RFC4-211ENST00000460408 ERO1AQ96HE7 468 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms