RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 ELAVL4P26378 380 aaKnown RBP12.64□□□□□ -0.39
SRRT-206ENST00000460194 GRIA3P42263 894 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 GDF10P55107 478 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 ACVR1Q04771 509 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 CDC16Q13042 620 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 TLR1Q15399 786 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
SRRT-206ENST00000460194 YOD1Q5VVQ6 348 aaPredicted RBP12.64□□□□□ -0.39
SRRT-206ENST00000460194 ATG9BQ674R7 924 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 SHISA6Q6ZSJ9 500 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 ZNF534Q76KX8 674 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 CNGA4Q8IV77 575 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 PARP9Q8IXQ6 854 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 LKAAEAR1Q8TD35 194 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 SOX17Q9H6I2 414 aaPredicted RBP12.64□□□□□ -0.39
SRRT-206ENST00000460194 MRM3Q9HC36 420 aaKnown RBP12.64□□□□□ -0.39
SRRT-206ENST00000460194 SEMA3GQ9NS98 782 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 HIVEP1P15822 2718 aa12.64□□□□□ -0.39
SRRT-206ENST00000460194 IGLV3-12A0A075B6K2 115 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 A0A1W2PQ72 361 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 AKR1B15C9JRZ8 316 aaPredicted RBP12.63□□□□□ -0.39
SRRT-206ENST00000460194 PCDH17O14917 1159 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 NRP2O60462 931 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
SRRT-206ENST00000460194 SLCO2B1O94956 709 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 SOX11P35716 441 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 OR1D4P47884 311 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 KLF1Q13351 362 aaPredicted RBP12.63□□□□□ -0.39
SRRT-206ENST00000460194 MFAP5Q13361 173 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 SEMA3AQ14563 771 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 TUBB8Q3ZCM7 444 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 FIGLAQ6QHK4 219 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 ISLR2Q6UXK2 745 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 LRRC57Q8N9N7 239 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 OR2L8Q8NGY9 312 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 DENND1AQ8TEH3 1009 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 THOC3Q96J01 351 aaKnown RBP12.63□□□□□ -0.39
SRRT-206ENST00000460194 ZNF778Q96MU6 729 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 IL17FQ96PD4 163 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 SYNPO2LQ9H987 977 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 LRRC40Q9H9A6 602 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 NXT1Q9UKK6 140 aaKnown RBP12.63□□□□□ -0.39
SRRT-206ENST00000460194 RIMKLBQ9ULI2 386 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 DUSP10Q9Y6W6 482 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 AKAP9Q99996 3911 aa12.63□□□□□ -0.39
SRRT-206ENST00000460194 C2CD3Q4AC94 2353 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 TARM1B6A8C7 271 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 RASGRF2O14827 1237 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 S1PR4O95977 384 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 HPP00738 406 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 TPM1P09493 284 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 OR56A5P0C7T3 313 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 PIM1P11309 404 aaPredicted RBP12.62□□□□□ -0.39
SRRT-206ENST00000460194 GRNP28799 593 aaKnown RBP12.62□□□□□ -0.39
SRRT-206ENST00000460194 PER3P56645 1201 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 KLC1Q07866 573 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 GRM7Q14831 915 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 CCDC38Q502W7 563 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 ZC3H12BQ5HYM0 836 aaKnown RBP12.62□□□□□ -0.39
SRRT-206ENST00000460194 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 FRMPD2BQ6IN97 320 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 SLC35B2Q8TB61 432 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 ZUFSPQ96AP4 578 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 ANP32EQ9BTT0 268 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 CARD6Q9BX69 1037 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 IL1RAPL1Q9NZN1 696 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 IMPACTQ9P2X3 320 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 SLC2A6Q9UGQ3 507 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 CIDEBQ9UHD4 219 aa12.62□□□□□ -0.39
SRRT-206ENST00000460194 R3HDM2Q9Y2K5 976 aaKnown RBP12.62□□□□□ -0.39
SRRT-206ENST00000460194 LOC105369274A0A096LPK9 316 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 LOC102723532A0A0G2JNH3 316 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 A0A1B0GUH1 482 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 A0A1W2PPV9 198 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 ARHGAP10A1A4S6 786 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 MACROD2A1Z1Q3 448 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 IQCF5A8MTL0 148 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 SRPX2O60687 465 aaPredicted RBP12.61□□□□□ -0.39
SRRT-206ENST00000460194 JRKO75564 520 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 TJP3O95049 919 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 GOT2P00505 430 aaKnown RBP12.61□□□□□ -0.39
SRRT-206ENST00000460194 AOAHP28039 575 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 RWDD2BP57060 319 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 YBX1P67809 324 aaKnown RBP12.61□□□□□ -0.39
SRRT-206ENST00000460194 CCSMST1Q4G0I0 132 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 CCDC181Q5TID7 509 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 UNC5DQ6UXZ4 953 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 LINC00696Q6ZRV3 163 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 LAPTM4BQ86VI4 370 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 FJX1Q86VR8 437 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 DCUN1D3Q8IWE4 304 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 OR4N4Q8N0Y3 316 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 ARHGEF39Q8N4T4 335 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 C2orf73Q8N5S3 287 aaPredicted RBP12.61□□□□□ -0.39
SRRT-206ENST00000460194 AMER2Q8N7J2 671 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 OR52K1Q8NGK4 314 aa12.61□□□□□ -0.39
SRRT-206ENST00000460194 HMGCLL1Q8TB92 370 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms