RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 WHRNQ9P202 907 aa13.74□□□□□ -0.21
THBS3-204ENST00000460050 TRMT6Q9UJA5 497 aaKnown RBP13.74□□□□□ -0.21
THBS3-204ENST00000460050 KLHL20Q9Y2M5 609 aa13.74□□□□□ -0.21
THBS3-204ENST00000460050 SPTA1P02549 2419 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 PCM1Q15154 2024 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 COL6A6A6NMZ7 2263 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 E7EQ34 232 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 TK2O00142 265 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 NKX2-8O15522 239 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 PRICKLE3O43900 615 aaPredicted RBP13.73□□□□□ -0.21
THBS3-204ENST00000460050 KATNA1O75449 491 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 CBSLP0DN79 551 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 TCN2P20062 427 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 MCM3P25205 808 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 PSMB5P28074 263 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 OAS2P29728 719 aaKnown RBP13.73□□□□□ -0.21
THBS3-204ENST00000460050 CBSP35520 551 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 CDKN2DP55273 166 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 TIAL1Q01085 375 aaKnown RBP eCLIP13.73□□□□□ -0.21
THBS3-204ENST00000460050 MC1RQ01726 317 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 CDC20Q12834 499 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 LY6DQ14210 128 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 TBR1Q16650 682 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 CYP2A13Q16696 494 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 DUPD1Q68J44 220 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 FAM199XQ6PEV8 388 aaPredicted RBP13.73□□□□□ -0.21
THBS3-204ENST00000460050 PIWIL4Q7Z3Z4 852 aaKnown RBP13.73□□□□□ -0.21
THBS3-204ENST00000460050 GPR135Q8IZ08 494 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 DNAJC22Q8N4W6 341 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 MR1Q95460 341 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 CLIP3Q96DZ5 547 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 SLC7A5P2Q9GIP4 190 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 ACTR5Q9H9F9 607 aaPredicted RBP13.73□□□□□ -0.21
THBS3-204ENST00000460050 INTS7Q9NVH2 962 aaKnown RBP13.73□□□□□ -0.21
THBS3-204ENST00000460050 TAS2R13Q9NYV9 303 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 GRHL1Q9NZI5 618 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 CDC23Q9UJX2 597 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 FER1L5A0AVI2 2057 aa13.73□□□□□ -0.21
THBS3-204ENST00000460050 ANKRD12Q6UB98 2062 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 A0A1W2PPV9 198 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 C21orf140B9A014 251 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 MYO1CO00159 1063 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 MEN1O00255 615 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 EIF3FO00303 357 aaPredicted RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 ZNF749O43361 778 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 OR2B3O76000 313 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 URI1O94763 535 aaPredicted RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 FKBP9O95302 570 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 PRB1P04280 392 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 KLK3P07288 261 aaPredicted RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 ERGP11308 486 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 RORAP35398 523 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 CKAP4Q07065 602 aaKnown RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 MGAT5Q09328 741 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 CBLBQ13191 982 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 FASTKQ14296 549 aaKnown RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 FRG1Q14331 258 aaKnown RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 LINC00303Q3SY05 128 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 ATP1A1-AS1Q5TC04 95 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 UGT3A1Q6NUS8 523 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 C16orf46Q6P387 395 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 FIGLAQ6QHK4 219 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 CYHR1Q6ZMK1 362 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 ZBED8Q8IZ13 594 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 OR2A1Q8NGT9 310 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 ASB11Q8WXH4 323 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 LRFN5Q96NI6 719 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 MIPEPQ99797 713 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 ARHGAP9Q9BRR9 750 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 RAB17Q9H0T7 212 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 PCMTD2Q9NV79 361 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 ZFATQ9P243 1243 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 KCND3Q9UK17 655 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 CORO1CQ9ULV4 474 aaPredicted RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 PLCL2Q9UPR0 1127 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 UTP11Q9Y3A2 253 aaKnown RBP13.72□□□□□ -0.21
THBS3-204ENST00000460050 PCDHGA6Q9Y5G7 932 aa13.72□□□□□ -0.21
THBS3-204ENST00000460050 H3BMH7 237 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 GFYI3L273 518 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 SYF2O95926 243 aaKnown RBP13.71□□□□□ -0.21
THBS3-204ENST00000460050 CTSBP07858 339 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 SKIV2L2P42285 1042 aaKnown RBP13.71□□□□□ -0.21
THBS3-204ENST00000460050 RGS4P49798 205 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 ARHGAP19Q14CB8 494 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 CRTC2Q53ET0 693 aaPredicted RBP13.71□□□□□ -0.21
THBS3-204ENST00000460050 FCRL6Q6DN72 434 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 LRRC8EQ6NSJ5 796 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 BORAQ6PGQ7 559 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 PAQR3Q6TCH7 311 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 SUSD1Q6UWL2 747 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 ZNF517Q6ZMY9 492 aaPredicted RBP13.71□□□□□ -0.21
THBS3-204ENST00000460050 UBE2R2Q712K3 238 aaPredicted RBP13.71□□□□□ -0.21
THBS3-204ENST00000460050 SYTL1Q8IYJ3 562 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 DSELQ8IZU8 1212 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 GPATCH11Q8N954 259 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 FBXO15Q8NCQ5 510 aaPredicted RBP13.71□□□□□ -0.21
THBS3-204ENST00000460050 OR2L3Q8NG85 312 aa13.71□□□□□ -0.21
THBS3-204ENST00000460050 PYROXD1Q8WU10 500 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms