RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ENO2P09104 434 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 C1QTNF9P0C862 333 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 JMJD7P0C870 316 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 FGF3P11487 239 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 NELFEP18615 380 aaKnown RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 MAGP20916 626 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 CRABP2P29373 138 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 CSTF2P33240 577 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 MLLT3P42568 568 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 SLCO1A2P46721 670 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 TSTA3Q13630 321 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 RTP5Q14D33 572 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 DEFB110Q30KQ9 67 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 FRA10AC1Q70Z53 315 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 TBC1D1Q86TI0 1168 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-206ENST00000459895 SYTL1Q8IYJ3 562 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 FBXO39Q8N4B4 442 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 MZB1Q8WU39 189 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 KLHL6Q8WZ60 621 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 EXT2Q93063 718 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 PARVBQ9HBI1 364 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 APMAPQ9HDC9 416 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 SLC6A20Q9NP91 592 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 PCMTD2Q9NV79 361 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 ARL15Q9NXU5 204 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 EURLQ9NYK6 297 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 FOXJ2Q9P0K8 574 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 TAC3Q9UHF0 121 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 BTRCQ9Y297 605 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 KLHL20Q9Y2M5 609 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 OARD1Q9Y530 152 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 PCDHGA8Q9Y5G5 932 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 ANKRD12Q6UB98 2062 aa12.38□□□□□ -0.43
COL18A1-206ENST00000459895 SDK2Q58EX2 2172 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 SLC9B1P1A6NJY1 282 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 E7ENX8 843 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 PRICKLE3O43900 615 aaPredicted RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 KRT37O76014 449 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ZBTB11O95625 1053 aaPredicted RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 GUCA1CO95843 209 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 C2P06681 752 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 LTA4HP09960 611 aaKnown RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 NUDT17P0C025 328 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 TFEBP19484 476 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 CNTFP26441 200 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 OAS2P29728 719 aaKnown RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 MAPK10P53779 464 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 AP1S2P56377 157 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 YBX1P67809 324 aaKnown RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 TAP2Q03519 686 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 TUBB3Q13509 450 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ARHGAP19Q14CB8 494 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ZIC1Q15915 447 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ZXDCQ2QGD7 858 aaPredicted RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 CARFQ8N187 725 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 MREGQ8N565 214 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 OR2L3Q8NG85 312 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 MCOLN3Q8TDD5 553 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 SMPDL3AQ92484 453 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ANKRD7Q92527 254 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 RNF31Q96EP0 1072 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 MED8Q96G25 268 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 TRAPPC9Q96Q05 1148 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 MIPEPQ99797 713 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ACAT2Q9BWD1 397 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 VPS11Q9H270 941 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ALG9Q9H6U8 611 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 CCDC177Q9NQR7 707 aaPredicted RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 C1GALT1Q9NS00 363 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 ABCF3Q9NUQ8 709 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 AKAP7Q9P0M2 348 aaPredicted RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 NOVA2Q9UNW9 492 aaKnown RBP12.37□□□□□ -0.43
COL18A1-206ENST00000459895 SH2B3Q9UQQ2 575 aa12.37□□□□□ -0.43
COL18A1-206ENST00000459895 PABPN1LA6NDY0 278 aaKnown RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 ZNF839A8K0R7 811 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 CDRT15L2A8MXV6 281 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 C9orf172C9J069 976 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 DXOO77932 396 aaKnown RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 TNFSF15O95150 251 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 FOLR1P15328 257 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 TYK2P29597 1187 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 RPA3P35244 121 aaPredicted RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 GLRBP48167 497 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 ATP6V0D1P61421 351 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 GPR19Q15760 415 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 C18orf21Q32NC0 220 aaPredicted RBP12.36□□□□□ -0.43
COL18A1-206ENST00000459895 PRAMEF13Q5VWM6 474 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 KIAA1614Q5VZ46 1190 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 AGTRAPQ6RW13 159 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 IGF2-ASQ6U949 168 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 CDHR3Q6ZTQ4 885 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 CLEC14AQ86T13 490 aa12.36□□□□□ -0.43
COL18A1-206ENST00000459895 KMT5CQ86Y97 462 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms