RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 OXR1Q8N573 874 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 VANGL1Q8TAA9 524 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 ELMO3Q96BJ8 720 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 CCDC3Q9BQI4 270 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 TKTL2Q9H0I9 626 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 INTS7Q9NVH2 962 aaKnown RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 TAS2R9Q9NYW1 312 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 COMMD3Q9UBI1 195 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 ZNF282Q9UDV7 671 aaPredicted RBP9.56□□□□□ -0.88
UFD1-205ENST00000459854 SEC14L3Q9UDX4 400 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 HCN2Q9UL51 889 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 FKBP7Q9Y680 259 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 U3KQV3 271 aa9.56□□□□□ -0.88
UFD1-205ENST00000459854 PRORSD1PA6NEY8 169 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 TISP43B9A030 160 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 DISC1C4P0D8 188 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 CBX4O00257 560 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SULT1B1O43704 296 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 ZNF623O75123 536 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 BANF1O75531 89 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 AP2A1O95782 977 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 FOSL1P15407 271 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 FPR1P21462 350 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 MMP8P22894 467 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 CSTF2P33240 577 aaKnown RBP eCLIP9.55□□□□□ -0.88
UFD1-205ENST00000459854 CDKN2BP42772 138 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 RBBP4Q09028 425 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 BOP1Q14137 746 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 ZACNQ401N2 412 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 RABL3Q5HYI8 236 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 IDNKQ5T6J7 187 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 CXorf57Q6NSI4 855 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 TIFABQ6ZNK6 161 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 TRMT11Q7Z4G4 463 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 MMAAQ8IVH4 418 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 CARNMT1Q8N4J0 409 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SNX33Q8WV41 574 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SLC13A3Q8WWT9 602 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 NCSTNQ92542 709 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 MRPS31Q92665 395 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 MYO19Q96H55 970 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 TSNAXQ99598 290 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 LGR4Q9BXB1 951 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 CEP41Q9BYV8 373 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 TOR3AQ9H497 397 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 IFT46Q9NQC8 304 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PTTG3PQ9NZH4 202 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 A0A0G2JMZ2 1700 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 ZNF236Q9UL36 1845 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 TRAPPC13A5PLN9 417 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 ATP6AP2O75787 350 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 AFF1P51825 1210 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 THOP1P52888 689 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 CLCQ05315 142 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PLEKHN1Q494U1 663 aaPredicted RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 TLDC1Q6P9B6 456 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PAOXQ6QHF9 649 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 CMC1Q7Z7K0 106 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PHACTR4Q8IZ21 702 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SDR16C5Q8N3Y7 309 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 ZNF486Q96H40 463 aaPredicted RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 HNRNPABQ99729 332 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 PPA2Q9H2U2 334 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 AGO3Q9H9G7 860 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 TRPV4Q9HBA0 871 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 FARSBQ9NSD9 589 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 TMEM184CQ9NVA4 438 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 TBX21Q9UL17 535 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 OAZ3Q9UMX2 235 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SMIM28A0A1B0GU29 152 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 K7EPI3 171 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 M0R036 132 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 ARPC2O15144 300 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 IFNA21P01568 189 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 MSX2P35548 267 aaPredicted RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 ERVK-8P63133 956 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PLD1Q13393 1074 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 LARS2Q15031 903 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 TMEM214Q6NUQ4 689 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 XKR5Q6UX68 686 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 RTL4Q6ZR62 310 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 FAM183BPQ6ZVS7 135 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PDZD9Q8IXQ8 264 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SCML4Q8N228 414 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 DCAKDQ8WVC6 231 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SGCDQ92629 289 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 GAL3ST3Q96A11 431 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 AP2M1Q96CW1 435 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SNX27Q96L92 541 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 SAMD11Q96NU1 681 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 PKP2Q99959 881 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 GON7Q9BXV9 100 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 ATP13A3Q9H7F0 1226 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 FARSAQ9Y285 508 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 LRRC14BA6NHZ5 514 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 NT5C1B-RDH14C9J2C7 533 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 GMFGO60234 142 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 RPP40O75818 363 aaKnown RBP9.55□□□□□ -0.88
UFD1-205ENST00000459854 CTXN3Q4LDR2 81 aa9.55□□□□□ -0.88
UFD1-205ENST00000459854 XKR6Q5GH73 641 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms