RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 EML5Q05BV3 1969 aa8.71□□□□□ -1.02
VPS50-207ENST00000458530 LNP1A1A4G5 178 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 FAM221BA6H8Z2 402 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PCNX2A6NKB5 2137 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PRAMEF26H0Y7S4 382 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SDHDO14521 159 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 TNFRSF10CO14798 259 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SLC31A1O15431 190 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 UGDHO60701 494 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 WDR47O94967 919 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 APBB3O95704 486 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 HGFP14210 728 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PCSK2P16519 638 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SPINK2P20155 84 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 MAT2AP31153 395 aaKnown RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 HSD17B2P37059 387 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 CCR10P46092 362 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SCTRP47872 440 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PREPP48147 710 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 AGTR2P50052 363 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NOVA1P51513 510 aaKnown RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 THOP1P52888 689 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PNLIPRP1P54315 467 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 CORO7P57737 925 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PPP2CBP62714 309 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PPP2CAP67775 309 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SH3BP2P78314 561 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 BTKQ06187 659 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 ABRQ12979 859 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 FGL2Q14314 439 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NFATC4Q14934 902 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 ZNF658BQ4V348 819 aaPredicted RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 SLC9B1Q4ZJI4 515 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 KIAA0895LQ68EN5 471 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 RNF165Q6ZSG1 346 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 MAVSQ7Z434 540 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 MILR1Q7Z6M3 343 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 VRK3Q8IV63 474 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 DCUN1D3Q8IWE4 304 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 DDIASQ8IXT1 998 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 KLHDC8AQ8IYD2 350 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 ARHGAP24Q8N264 748 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 PELI3Q8N2H9 469 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SNX31Q8N9S9 440 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 CFAP61Q8NHU2 1237 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NAT14Q8WUY8 206 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 KLK6Q92876 244 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 CMTM5Q96DZ9 223 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NSL1Q96IY1 281 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 WDR92Q96MX6 357 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NSUN5Q96P11 429 aaKnown RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 EBF4Q9BQW3 602 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 TMEM79Q9BSE2 394 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NTMT1Q9BV86 223 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SCNM1Q9BWG6 230 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 RAB11FIP5Q9BXF6 653 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NMUR2Q9GZQ4 415 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 DUSP15Q9H1R2 295 aaPredicted RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 NOL11Q9H8H0 719 aaKnown RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 IPPKQ9H8X2 491 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 MBNL1Q9NR56 388 aaKnown RBP8.7□□□□□ -1.02
VPS50-207ENST00000458530 DNAJC11Q9NVH1 559 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 ZNHIT2Q9UHR6 403 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 TAGLN3Q9UI15 199 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 LNPEPQ9UIQ6 1025 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 SLC17A4Q9Y2C5 497 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 TMEM98Q9Y2Y6 226 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 NEUROG3Q9Y4Z2 214 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 OR1A2Q9Y585 309 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 HEBP2Q9Y5Z4 205 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 HS3ST3A1Q9Y663 406 aa8.7□□□□□ -1.02
VPS50-207ENST00000458530 ASCC3Q8N3C0 2202 aaKnown RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 TMEM202A6NGA9 273 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 LRRC14BA6NHZ5 514 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 C4orf47A7E2U8 309 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ARHGEF33A8MVX0 844 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 TMEM233B4DJY2 109 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 E9PBE3 544 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 H0YHG0 523 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 MYO1CO00159 1063 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 UBFD1O14562 309 aaKnown RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 CDX4O14627 284 aaPredicted RBP8.69□□□□□ -1.02
VPS50-207ENST00000458530 CLGNO14967 610 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 UBDO15205 165 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 TAPBPO15533 448 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 LATO43561 262 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 KLHL41O60662 606 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 NDUFS2O75306 463 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 FSBPO95073 299 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 KRT6AP02538 564 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 KRT6BP04259 564 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 EPHA3P29320 983 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 CD6P30203 668 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 ACSL1P33121 698 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 RABIFP47224 123 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 SLC6A12P48065 614 aa8.69□□□□□ -1.02
VPS50-207ENST00000458530 KRT6CP48668 564 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms