RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ABCF3Q9NUQ8 709 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 NSMCE4AQ9NXX6 385 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 SLC17A6Q9P2U8 582 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 IL17BQ9UHF5 180 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 CORO1CQ9ULV4 474 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 PLCL2Q9UPR0 1127 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 KLHL20Q9Y2M5 609 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 CELSR3Q9NYQ7 3312 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 KRT87PA6NCN2 255 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 EIF3FO00303 357 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 ATXN7O15265 892 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 PRKAR1AP10644 381 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 SAT1P21673 171 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 CMPK1P30085 196 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 FRG1Q14331 258 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 ZIC1Q15915 447 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 CYP2A13Q16696 494 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 SOWAHCQ53LP3 525 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 ZC3H12BQ5HYM0 836 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 RBM20Q5T481 1227 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 HECTD2Q5U5R9 776 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 PRAMEF17Q5VTA0 474 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 FAM45BPQ6NSW5 357 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 FAM199XQ6PEV8 388 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 ZNF572Q7Z3I7 529 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 STRA8Q7Z7C7 330 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 SYTL1Q8IYJ3 562 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 LSM14AQ8ND56 463 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 MNS1Q8NEH6 495 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 FAM45AQ8TCE6 357 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 MCOLN3Q8TDD5 553 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 CT55Q8WUE5 264 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 EEF1AKMT1Q8WVE0 214 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 ASB11Q8WXH4 323 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 SMPDL3AQ92484 453 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 STARD8Q92502 1023 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 SLC39A7Q92504 469 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 CDKL2Q92772 493 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 ZUFSPQ96AP4 578 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 PKP4Q99569 1192 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 MIPEPQ99797 713 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 SLC12A9Q9BXP2 914 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 CHRNA10Q9GZZ6 450 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 TXNDC16Q9P2K2 825 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 MED16Q9Y2X0 877 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 VWA7Q9Y334 891 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 AP1M2Q9Y6Q5 423 aa17.41■□□□□ 0.38
PDLIM2-215ENST00000456545 TP73O15350 636 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 NKX2-8O15522 239 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 ZNF749O43361 778 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 ITGB2P05107 769 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 AGXTP21549 392 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 GRIA3P42263 894 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 PNLIPRP1P54315 467 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 IL2P60568 153 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 SLC7A5Q01650 507 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 DNASE1L3Q13609 305 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 ARHGAP19Q14CB8 494 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 THEMIS2Q5TEJ8 643 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 PAQR3Q6TCH7 311 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 CYHR1Q6ZMK1 362 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 PIWIL4Q7Z3Z4 852 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 HMGCLL1Q8TB92 370 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 EXTL1Q92935 676 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 WBP1Q96G27 269 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 CATSPER2Q96P56 530 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 WDR83Q9BRX9 315 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 ACAT2Q9BWD1 397 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 SPRTNQ9H040 489 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 PLAC1Q9HBJ0 212 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 GRHL1Q9NZI5 618 aa17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 MRPS18BQ9Y676 258 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-215ENST00000456545 TARM1B6A8C7 271 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 C21orf140B9A014 251 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 GFYI3L273 518 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 MYO1CO00159 1063 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 MEN1O00255 615 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 C8GP07360 202 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 HIST1H2AGP0C0S8 130 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 HIST1H2ADP20671 130 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 PSMB5P28074 263 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 SSTR1P30872 391 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 SLC12A2P55011 1212 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 CDKN2DP55273 166 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 GPS2Q13227 327 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 ERV3-1Q14264 604 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 FASTKQ14296 549 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 NAA25Q14CX7 972 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 TLDC1Q6P9B6 456 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 SUSD1Q6UWL2 747 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 C3orf62Q6ZUJ4 267 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 SLC26A11Q86WA9 606 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 MCATQ8IVS2 390 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 KIF18AQ8NI77 898 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 DENND1AQ8TEH3 1009 aa17.39■□□□□ 0.37
PDLIM2-215ENST00000456545 LINGO1Q96FE5 620 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms