RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 C1orf52Q8N6N3 182 aaKnown RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 TRIB2Q92519 343 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 MED30Q96HR3 178 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 POLR2J2Q9GZM3 115 aaKnown RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 POLR2J3Q9H1A7 115 aaKnown RBP5.12□□□□□ -1.59
CSMD3-204ENST00000455883 TAS2R10Q9NYW0 307 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 DNMT3LQ9UJW3 386 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 HCN2Q9UL51 889 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 HCFC1P51610 2035 aa5.12□□□□□ -1.59
CSMD3-204ENST00000455883 USP54Q70EL1 1684 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 C20orf202A1L168 122 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FAM196BA6NMK8 535 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 WASH4PA8MWX3 477 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MAGEB17A8MXT2 336 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF14P17017 642 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RPA3P35244 121 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MAGEA12P43365 314 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RAB8AP61006 207 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ADAM17P78536 824 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SSBP1Q04837 148 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NRF1Q16656 503 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 LBHQ53QV2 105 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DNAJC14Q6Y2X3 702 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 LRRC55Q6ZSA7 311 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MON1AQ86VX9 555 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PHYKPLQ8IUZ5 450 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF440Q8IYI8 595 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR4L1Q8NH43 312 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 HCAR2Q8TDS4 363 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 C22orf15Q8WYQ4 148 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 AZIN2Q96A70 460 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RNF150Q9ULK6 438 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FAM230AA0A1W2PPH8 454 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CAPN8A6NHC0 703 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CACNB4O00305 520 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FBP2O00757 339 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CYB5BO43169 146 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR3A3P47888 321 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR3A2P47893 321 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CD300LGQ6UXG3 332 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 BEST4Q8NFU0 473 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NTAN1Q96AB6 310 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FAM83DQ9H4H8 585 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RYDENQ9NUL5 291 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SDHAF2Q9NX18 166 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CIB4A0PJX0 185 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 AGAP14A8MT82 685 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MEN1O00255 615 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF208O43345 1280 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 XPNPEP2O43895 674 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CD63P08962 238 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CHMP24386 653 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CDH13P55290 713 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CD81P60033 236 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 BLOC1S1P78537 153 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 AIMP2Q13155 320 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CRHR2Q13324 411 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PAN3Q58A45 887 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CARD16Q5EG05 197 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GCNT7Q6ZNI0 430 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 AMIGO1Q86WK6 493 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FAM46DQ8NEK8 389 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TAS1R2Q8TE23 839 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PLD4Q96BZ4 506 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RNF157Q96PX1 679 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 APBA2Q99767 749 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CNPPD1Q9BV87 410 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SNX15Q9NRS6 342 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TBC1D24Q9ULP9 559 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 EME2A4GXA9 379 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 D6RAR5 112 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR1I1O60431 355 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PPP3CBP16298 524 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 HOXA9P31269 272 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SLC3A1Q07837 685 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 METTL11BQ5VVY1 283 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NCCRP1Q6ZVX7 275 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GALNT7Q86SF2 657 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 POMKQ9H5K3 350 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 KLHL13Q9P2N7 655 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FBXO5Q9UKT4 447 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PCDHB11Q9Y5F2 797 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RFPL1O75677 317 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RETP07949 1114 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PIM1P11309 404 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 M6PRP20645 277 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GLUD2P49448 558 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NUDT6P53370 316 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PRMT2P55345 433 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 KCNJ2P63252 427 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CACNB1Q02641 598 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 LASP1Q14847 261 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 XYLT1Q86Y38 959 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 C7orf61Q8IZ16 206 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SLC13A3Q8WWT9 602 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR5B12Q96R08 314 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 HINFPQ9BQA5 517 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ABHD16BQ9H3Z7 469 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NCOR2Q9Y618 2525 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 LRP5LA4QPB2 252 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms